Lates calcarifer (barramundi perch): 108889683
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Entry
108889683 CDS
T04895
Name
(RefSeq) beta-1,4-galactosyltransferase 7
KO
K00733
xylosylprotein 4-beta-galactosyltransferase [EC:
2.4.1.133
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
lcf00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
lcf01100
Metabolic pathways
Module
lcf_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
108889683
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
108889683
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108889683
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.133 xylosylprotein 4-beta-galactosyltransferase
108889683
Glycosyltransferases [BR:
lcf01003
]
Glycan extension
O-Glycan
108889683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7C
Glyco_transf_7N
CHGN
Motif
Other DBs
NCBI-GeneID:
108889683
NCBI-ProteinID:
XP_018541792
UniProt:
A0A4W6G565
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All DBs
Position
LG8:complement(24608685..24686814)
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AA seq
316 aa
AA seq
DB search
MMYSSRRKPVLYFKEERRFLSGRCTVYKLFGLCMVLVLVSLLWLQLSCSGEMYKDTPLPP
QQPPCPADSPASAADNPSWGPHKLALIIPFRERFEELLVFVPSMHAFLNKKKIRHKIFII
NQVDHYRFNRASLINVGYLESGNDTDYLAMHDVDLLPQNDALDYGFPEDGPFHVASPELH
PLYHYKTYVGGILLLTKKHYHMCNGMSNRFWGWGREDDEFYRRLRKAELQLFRPSGITTG
YKTFLHIHDPAWRKRDQKRVAAQKQEQFKVDPEGGLTNLHYQVESRQELTISGAPCTVIN
TKLECDQNETPWCLLA
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgatgtattcatcgagaagaaagcccgtcctctacttcaaagaggagaggaggttcctg
tctggtagatgtacggtctacaagctgttcggcctctgcatggtgctggtgctggtctct
ctgctctggctgcagctcagctgttcaggtgaaatgtacaaagacacacccctccccccg
cagcagccgccctgccccgctgacagtccggcgtctgcagcggacaacccctcctggggt
cctcacaaactggccctcatcatccccttcagagagcgcttcgaggagctgctggtgttt
gttccctccatgcacgctttcctcaacaagaagaagatccgccacaagatcttcatcatc
aaccaggtggatcactacagatttaatcgagcgtctctcatcaacgtgggttacctggag
agcggtaacgacacagactacctggccatgcacgacgtagacctgctgccccagaacgac
gctctggactacggtttccccgaggacgggcctttccacgtggcctcacctgagctgcat
ccgctctaccactacaagacctacgtaggaggaatcctgctgctcactaagaaacattac
cacatgtgtaatgggatgtcaaaccggttctggggttggggcagagaggatgacgagttt
tacagaagactgagaaaagctgaactacagttgttcaggccgagtggaatcactacagga
tataaaaccttcctccacatccacgacccggcctggaggaagagagaccagaagagagtc
gcagctcagaaacaggagcagtttaaggtggatccggagggggggctgactaacctgcat
taccaggtggagtccagacaggagctgaccatcagcggggctccctgcaccgtcatcaac
accaaactggagtgtgaccagaacgagacgccctggtgtctcctggcgtag
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