Lates calcarifer (barramundi perch): 108889692
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Entry
108889692 CDS
T04895
Name
(RefSeq) anoctamin-5b isoform X1
KO
K19480
anoctamin-5
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108889692
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108889692
Ion channels [BR:
lcf04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
108889692
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Motif
Pfam:
Anoctamin
Anoct_dimer
HTH_57
Motif
Other DBs
NCBI-GeneID:
108889692
NCBI-ProteinID:
XP_018541809
UniProt:
A0AAJ7V9E4
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Position
LG2:3196932..3219067
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AA seq
924 aa
AA seq
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MRRITGKAKDETLIELQSTADSHTGDGPAVLTAFRINLHSDENGGNGVSSLSDRGTLPGH
TETDKLQPNKDTVFFRDGVRRIDFVLSYVDDKDGEKKQERRREFEANLEKVGLELETEDK
SDSKDQKTYFLKIHAPWDVLATYADVLKIKVPFKESDIPHSHDVPLEWLSQPFRLPEHIM
RPQSDYFTYHFDKTKTDFFLINDKDTFFPPSTRNRIVFYILARCPYYKEGRRDKDKTGIK
RLLSNGTYTAAFPVHDCRYWKRARDAECESERYNLYKHWAKFLCFYKEQPLNLIRKYYGE
KIGIYFAWLGFYTEMLFFAAVMGLICFTYGVLSYDDNISSKEICDANIGGNIVMCPLCDE
KCPFWRLNTTCLSSWQSHLFDNEGTVFFAIFMGIWVTLFLEFWKRRQARLEYEWDLVDFE
EEQQQLQIRPEFEIRCTNRRLNKITQEMEPYLPITSKCARFCLSGATVLFWISLIVACII
GVIAYRLAVYAAFASIIKDPMRKIQLVGRFITPQLATSVTASCINFVIIMILNFFYERVA
IWITDLEIPKTHLEYENRLTMKMFLFQFVNYYSSCFYVAFFKGKFVGYPGNYSYMFGSST
RLRNEECDPGGCLIELTTQLVIVMAGKQLWGNIQEALLPLMRNWWSSRKGRHHPENHYSR
WEQDHVLQNFSQLGLFYEYLEMVIQFGFITLFVASFPLAPLLALFNNILEIRVDAWKFTT
QFRRPVASKARNIGAWQEILNAVAILSVVTNAFIMAFTSDMIPRMVYLYAYSEKASMKDY
VNNSLSIYTISHITSHNMLNLTTDNWLDNSTTTCRYRDYRYPSGHQNAYARTMQFWHILA
AKMAFIIIMEHVVFVVKFFVAWMIPDIPSDVKARIKRERYLIQEYLHNYEVERLKLQLSA
SFITEPQSEMSLTSDKHEVLSECL
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgagacgaataacgggaaaggcgaaggatgaaactttgatcgagctgcagagcacggcg
gattcacataccggagatggtcctgcagtgttgaccgcattcaggataaacctgcactca
gatgaaaacggtggaaatggagtcagttcattatctgacagagggacactgcctggacat
acagagacggacaagctacaaccaaacaaagacaccgtgttcttcagggacggagtgcga
agaatagactttgtgttgtcttatgtggacgacaaagatggagaaaagaaacaggagagg
aggagggagtttgaggcaaaccttgagaaagtggggctggagctggagacagaggacaaa
tcggattcaaaagaccagaagacgtatttcttgaagatccatgctccatgggatgttctg
gccacctatgctgatgtgttaaagatcaaagttcccttcaaggagagtgatatcccccac
agtcacgatgtcccactggagtggctctcgcaacctttccgtctgcctgagcacataatg
cgcccacaatctgactacttcacctaccacttcgacaagaccaagaccgacttcttcctc
atcaatgacaaggacacattcttcccaccgtccacaagaaacagaattgtgttctacatc
ctggctcgctgtccgtattacaaagagggtcggagagacaaagacaagacaggaatcaag
cgattgctcagcaacgggacctacacagcagccttcccagttcacgactgtcgatactgg
aagagagcaagagacgctgaatgtgagagcgagcgctacaacttgtacaagcactgggcc
aagtttctttgtttttacaaagagcagcctctgaacctcatcaggaagtactatggggag
aagattgggatctactttgcctggttgggcttctacacggagatgctgttctttgcagcc
gtcatgggccttatatgtttcacctatggagtgctcagctatgatgacaacatatcaagt
aaagaaatatgtgacgccaatatcgggggcaacatcgtgatgtgtccactctgtgatgaa
aaatgtcctttctggaggctcaacactacttgtctctcatcctggcaatcccatctgttt
gataatgagggaacggtattctttgccatatttatggggatttgggtaactctgtttctg
gagttctggaagcggcgccaggcccggctggagtacgagtgggacctggtggattttgag
gaggagcagcaacagctccaaatccgaccagagtttgaaatcagatgcacgaacaggaga
ctcaacaagatcactcaggaaatggagccctatctccccatcaccagcaagtgtgctcgc
ttctgcctctctggagccactgttcttttctggatttctctgatagttgcctgtattatt
ggggtcatcgcgtacaggctggccgtgtatgctgcctttgcaagtatcattaaagacccc
atgaggaagatccagttggtgggcagattcatcactccacagttagcgacttctgtcacc
gcttcctgcatcaactttgtcatcatcatgatcctcaactttttctatgagagggtggcc
atttggatcactgatctggaaatcccaaagacccacctcgagtatgagaacaggttgacc
atgaagatgtttctgttccagtttgtcaactactactcctcatgtttctacgtggccttc
ttcaagggcaagtttgtgggttatcccgggaactattcatacatgtttggcagttccacc
agactgaggaatgaagagtgtgaccctggaggctgtctgattgagctgaccacacagctg
gtgatcgtcatggctgggaaacagttatgggggaacattcaggaggccctgctgccgttg
atgcgtaactggtggagtagcagaaaggggcgacaccaccctgagaaccattacagccgc
tgggagcaggaccacgtcctgcagaacttcagccagctgggcttgttctatgagtacctg
gagatggtgatccagtttggcttcatcactctgtttgtggcctctttccccctggctccc
ctcctggctctgttcaacaacatcctggagatcagggtggacgcctggaagttcactacc
cagttcagacgaccggtggcatccaaggctcgaaacattggagcgtggcaggagatcctc
aacgcggtggccattttgtccgttgttaccaacgcttttatcatggcgttcacctcagac
atgatcccacgcatggtctacctgtacgcctacagtgaaaaggccagcatgaaggactac
gtcaacaacagcctgtccatatacaccatctcacatataacttcacacaacatgctgaac
ctgacaactgacaactggttggataactcgaccaccacctgcagataccgtgactatcgt
tacccctcaggccaccagaatgcgtacgctcgcaccatgcagttctggcacatcctggca
gccaaaatggccttcatcatcatcatggaacatgtggtgtttgtggtgaagttcttcgtg
gcctggatgatcccagacatcccgtcggacgtgaaggcgcggattaaacgggaacgctac
ctgattcaggagtacctgcataactacgaggtggagaggctcaaactccagctgagcgcc
agtttcatcacggagccacagtcagaaatgtccttgacgtcagacaagcacgaagtgctg
tctgagtgcctgtag
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