Lates calcarifer (barramundi perch): 108889735
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Entry
108889735 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04060
Cytokine-cytokine receptor interaction
lcf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108889735
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108889735
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lcf04052
]
108889735
Cytokines and neuropeptides [BR:
lcf04052
]
Cytokines
Transforming growth factors (RSTK binding)
108889735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
Motif
Other DBs
NCBI-GeneID:
108889735
NCBI-ProteinID:
XP_018541875
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MKVVKRLCLLLSCWTLIYLHPVLGSLSRTRPTEQHQQHQHRLGEAAERAAGGGDGEHAHG
RTRQPAAGPGTWKPSPVSPARITRIRAGPPLIKGETTAVKSSAAAVTSASSASPLRSGAA
PVNRAQLQQLQRDRAVSLGRKEAVRSWLPGGDAHIKAHAPVAFSAHAAGKGVRTAAAGGG
GGGSPGRNFGKVAPGAARAAAPVRTGPPQRVASVQRQQQQQSGAAAPVAQRGTSYKALKL
SDRETHHKQPLVIPHDYMLSLYWSLSTGDLNSSALHEAGLANTITSFVDKGQDERGPQLR
RQRYHFNISSLERDGLLGAELRILRKRLSDPRRASIGSSASDGGRGGEGGGGGSSPCLKL
YTCTSGKQKAALLQMKAMEDLVNGFGSKWEVFDVWKVFKGFKNQQHQHSQQLCFELEALE
HRGGRPMDLRALGFARPGRTNKEKAFFLAFGRSKKRDLFYNEIKARSGNDNKTVYEYLFT
QRRMRRAPAVRVAKKTLQQPQSLPQHQAVKTRPRCNRKHLHVNFKEMGWDDWIIAPLEYD
AYHCDGACDFPIRSHLEPTNHAIIQTLINSMDPESAPPTCCVPTRLTPISILYIDSSNNV
VYKQYEDMVVEACGCR
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgtgaagcgactttgtctcctgctgagctgctggactctcatttacctgcac
cctgtcctcggttctctcagccggaccagaccgaccgagcagcaccagcagcaccagcac
cggcttggagaggcagcggagcgcgcggcgggcggcggggacggagagcacgcccacggg
agaaccagacaaccggcggccggtcctgggacgtggaaaccctcaccggtgagtccggcg
aggatcacgcgtatccgcgcgggtccgccgttaatcaagggcgagacgacagctgttaaa
agctcagccgccgcggtgacatctgcgtcctcagcctcgccgctgcgcagcggggccgcg
ccggtgaaccgcgcacagctgcagcagctgcagcgggacagagccgtcagcttggggcgc
aaagaggctgtgcgctcctggctgcccggcggggacgctcacattaaagcgcacgctccc
gtggcttttagcgcacatgcagcggggaaaggagtcaggactgcggctgctggaggtgga
ggcggtggctcaccggggagaaactttgggaaagtcgctcccggtgcagcgcgagcagct
gctcctgtgcgcaccgggcctccgcagagagtcgcctctgtgcagaggcagcagcagcag
cagagcggagcggcggctccggtggcgcagcggggaaccagctacaaggccctgaaactg
agcgaccgggagacgcatcacaagcagccgctggtgattcctcacgactacatgctgtcg
ctgtactggtctctgtccaccggggacctgaacagcagcgctctgcatgaagcggggctg
gccaacaccatcaccagcttcgtggataaaggacaagatgagcgcgggccccagctcaga
cggcagaggtatcacttcaacatcagctctctggaacgagacgggctcctgggggccgag
ctccgcatcctgaggaagcgtctgtctgacccccgcagagcctcgataggatcctcggcc
tctgatggaggcagaggaggagaagggggaggaggaggctcgtccccgtgcctgaagctg
tacacctgcacttcaggtaaacaaaaggctgctctgctgcagatgaaggccatggaggat
ctggtcaacggattcggcagcaaatgggaagtgtttgacgtatggaaagtcttcaagggt
ttcaaaaaccagcagcaccagcactcccagcagctgtgctttgaactggaggccctggag
cacagaggcggtcggcccatggacctgcgtgctcttgggttcgcccggcccggcaggacc
aacaaggaaaaggccttcttcttggcgtttggcagaagcaagaagcgcgaccttttctac
aacgagatcaaagctcggtcaggcaatgacaacaaaaccgtctacgagtacctgttcacc
cagagacggatgcgccgagctcccgctgtgagggtggcgaaaaaaacactgcagcagccg
cagtcgctgccccagcatcaggcagtgaagacgaggccgcgctgcaatcggaaacacctc
cacgtcaacttcaaggagatgggctgggacgactggatcatcgcgccgctggagtatgac
gcgtatcattgcgacggcgcctgtgacttccccatccgctcgcacctcgagccgaccaac
cacgccatcatacagaccctgatcaactccatggacccagagtcggcgccgcccacctgc
tgcgtccccaccagactcaccccgatcagcatcctctacatcgactcgtccaataacgtc
gtgtacaagcagtatgaagacatggtggtggaggcgtgtggctgcaggtag
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