Lates calcarifer (barramundi perch): 108889746
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Entry
108889746 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 1-like
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcf01001
]
108889746
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108889746
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
108889746
Protein kinases [BR:
lcf01001
]
Serine/threonine kinases: Other
Other
108889746
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108889746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
EIF3I
Beta-prop_WDR3_2nd
LisH
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
108889746
NCBI-ProteinID:
XP_018541884
UniProt:
A0AAJ7V9F1
LinkDB
All DBs
Position
Unknown
AA seq
1600 aa
AA seq
DB search
MSSSEEQPLEAVTAAVSAALSAAVSAAMAVAMAVDAKADLAALLDEWEEAQRGTTEQLLS
ILTKISELIERETGEYHKADPDPFDDRHPGRADPDCMLGQLLKMLFMNDDFTNALLDTYI
MTSRDLSLNTAACRLLQNIVPGLETAVVFQEKEGLVEKLFSWAREAERPLCIYATGLLAR
AMSNQEVATSYREENAQLVPIMIRRLHELQTEDAKNHFSPTNTPQNLPQDSQVEATKTSS
ISADQRDKAEGEDVGEETDKRDRDGESSRPVSKTSTKPLSLLGSARTNGGSSSSGGSSST
RLLPDFVYQASPDPEDRQGQGGGGGGKRRAVKENGRKAKQKLNFTSSSSRTDEEVERTDA
SEQPTNSSSWSEMSSMVIGSDYRLSPLSPAMEQRLILQYLTPLGDYQELLAVFMQLDTRS
LLMNYIDLRQTKNVQLTFDALLYLASLLLHKKFAAEFIAHGGVQKLLEIPRPSMAATGVS
LCLYYLAYNQDAMERVCMLPDGVLSDMVSYALWLLESSHASGVCHATMFFSISFSFRAVL
QLFDHQDGLRRLVNLISTLEILNTENEVSIMSDDQVFSSRQTAKHTCMALRRYFEAHLAV
KAEQVKQSLHTSDEGTIVPQQPFYKAYTYTREQIIEMMEFLIECGPPQLHWEPVEVFYKL
SCVPLMLQLISTACDWRTYYGRSDTVRYALDILAILTVVPKVQLVLADTVDVLDESRSPV
STVGMSIILGVAEGEVFVNDAEIQKSALQVIINCVCAPDQSLNTVGAFAVTPLRPSLHSQ
QPPTPHNRVLAHMWQVVQNNNGIKVLLSLLSVKMPITDADLIRALSCKALVGLSRSSAIR
QIISKLPLFTSSHIQQLMKEPVLQDKRSEHVRFCRYAAELTERVSGKPLLMGTDVSLARL
QKANVVAQSRITFSEKELLMLIRNHLVAKGLHDTANTLVKEANLSVASLCPNSSSCITPP
PSSSVIPRTCRLAGGIAARVAGHVGSSPVSSAASVSSSSPSSSRALVTHHPSGTSSSTSA
LPTPPPPHGQGSHLVGRILFTRERPVANCNSGKKLRALKQKSDHGAFIQTPAMKKQLERH
LPSPPTLDSIITEYLREQHARCPNPVTTCPPFSLFTPHRCPEPKQRRQASPNFTARLGSR
VLYPKYGGVDRGCLDRHLIFSRFRPMSVFHEGDGDESGFTCCAFSARERFLMLGTCNGHL
KFYNVFSGEEEANYTCHTSAITHLEPSRDGKLLLTSASWSVPLSALWSMDGVFSVKNSFV
DDHYVEFSKLSQDRVIGTKDQVAHIYDIQTGQKTLTLNDPALANNYKRNCATFNPTDDLV
LNDGVLWDVRASRAIHKFDKFNMNISGVFHPNGLEVIINTEIWDLRTFHLLHTVPALDQC
RVVFNSNATIMYGAMLQADDEDDAMDQQMKSPFGSSFRTFDATDYKPIATVDVKRNIFDL
CTDTKDCYLAVIENQDTVSLDTVCRLYEVGRQKLAEEGDDDDQDEDQDDDDSSDSDDDDD
DDDDDMDTDPLIEELANNDDPENEDRADSPTDEEIARLLGSNSDDDNNGDNDDDESDDSD
NSYRSDDGSDSFDPENPYYPEPSDDEDARLLESLHDRWFS
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctcagaggaacagccgttggaagccgtgacggctgctgtgtcggctgccttg
tcggccgctgtgtcggctgccatggcggttgctatggccgtggatgccaaggcagacctt
gccgcgctgttagacgaatgggaagaagcacagcggggcaccacagagcagctgctgtcc
atccttaccaaaatatctgagctgattgaacgagagacaggagagtatcacaaagcagac
cctgatccgtttgacgaccgtcatccaggacgggcggacccagactgcatgctgggacag
ctcctgaagatgctctttatgaacgatgacttcactaatgcactgttggacacatacata
atgaccagcagagacctgagcctcaacacagccgcatgtcgtctgcttcagaacatcgtg
ccgggcctggagactgctgtcgtcttccaggagaaggaaggtctggttgagaagttgttc
agctgggctcgtgaagctgagcgaccgctgtgcatctacgccacagggctgctggccaga
gccatgagcaaccaggaagtagcaaccagctacagagaggagaacgctcaactggtgccg
atcatgattcggcgcctgcacgagctgcaaactgaagatgccaagaatcacttcagtccc
accaacaccccccagaatctacctcaggactctcaggttgaagccaccaaaacctcaagc
atctcagcagaccagcgagacaaggcagagggggaggatgtgggagaggagacagacaaa
agagacagagacggagagagcagcaggccagtgtcgaagaccagtaccaaacctttgtcc
ctgctcggatcagccaggacaaatggcggcagtagcagcagcggtggatccagctccacc
cgactgcttccagactttgtgtaccaagcgagcccggacccagaggacaggcaggggcag
ggaggaggaggaggagggaaaagacgggcggtgaaagagaacgggaggaaggctaagcag
aagctcaactttacctcgtcctcctccaggactgacgaggaggtggagaggactgatgcc
agcgagcagccgaccaacagcagctcctggtctgagatgagctcgatggtgattggctcc
gactaccgcctctcaccgctgagcccggccatggagcagaggctcatcctgcagtatctg
acgccgctcggagattaccaggagttgcttgctgtgttcatgcagctggacacccggtca
ttactgatgaactacatagacctcagacagaccaagaatgtccagctcacctttgatgca
ctcctgtatctcgcctcactgctcctccataaaaagtttgcggcagagttcattgctcac
ggaggagtgcagaaacttctggagatcccgaggccgtctatggcagcaactggagtttct
ctctgtttgtactatctggcatacaaccaagatgccatggagagggtgtgcatgctcccg
gatggcgtgctgtcagacatggtgtcctacgctctgtggctgttggagtcgtcccacgcc
tcaggcgtctgccatgccaccatgttcttctccatttctttctccttcagggcggtgctg
cagctcttcgaccaccaggacggcctgcgcaggcttgtcaacttgatcagtactctggag
atccttaacacagagaatgaggtgtccataatgagcgatgaccaggtcttctccagccga
cagacggccaaacatacctgcatggccctgcgcaggtactttgaggctcacctggcagta
aaggctgaacaggtgaagcagtccctgcacacatcagatgaaggtaccattgttccccag
cagccgttttacaaggcatatacgtacaccagagaacagattattgagatgatggagttt
ctcatcgagtgtggtcctcctcagctccactgggaaccagtggaggttttctacaagttg
tcctgtgttcctttaatgctgcagctcatctctacagcctgtgactggaggacctactac
ggcaggagtgacacagtacgttacgccctcgacatcctggccatcctgaccgtggttcct
aaagtccagctggtgcttgcagacactgtagatgttctggatgaaagcaggtcacctgtt
tccactgtgggtatgagcatcatcctgggtgtcgcagagggcgaggtgtttgtcaacgat
gctgaaatccaaaagtctgcgctacaggtgataataaactgtgtgtgcgccccagaccag
agcctgaacactgtgggtgcttttgctgtcacccccctcaggccgtccctccactcccag
cagcctcccaccccccacaacagggtgctggcccacatgtggcaagtagtgcagaacaac
aacggtataaaggtgcttctgtcactgctgtcggtgaagatgcccatcacagacgcagac
ctgatccgtgctctgtcctgcaaggcgctggttggactctctcgcagctcagcgatcaga
caaatcatcagcaaactgccactgttcaccagcagccacatccaacagctgatgaaggag
ccagtgctgcaggacaaacgcagtgagcacgtccgtttctgccgctatgccgccgagctg
accgagcgagtgtctggcaagcctctcctcatgggtaccgacgtctcattggctcgtctg
cagaaagccaatgtggtcgcccagtcacggatcaccttttctgagaaggaactcctcatg
ctgatcaggaaccaccttgtggctaaggggctccatgacacggcgaacacgcttgttaaa
gaagcaaatttatctgtagcatctctctgtccgaactcttcctcctgcatcacccctcct
ccctcctcctccgtgattcccaggacttgccggttagcaggtgggattgcggcgcgtgtt
gccggccatgttggatcctctcctgtgtcctcagctgcctccgtttcctcctcctctccg
tcttcctctcgagcccttgtcactcatcacccatcaggcacctcttcatctacctctgct
cttcctactcctccacctcctcatggacagggctcacatctggttggccggatattgttc
acgcgggaacgcccagtggccaattgcaactcaggaaaaaaactcagggccctgaaacag
aagtctgaccatggcgctttcatacagactccagccatgaagaagcagctggagcgccac
cttccctcccccccgaccctcgacagcatcatcacagagtatctgagggaacaacacgcg
cgctgccccaaccctgtcaccacctgcccccctttctcccttttcaccccccaccgctgc
cccgagcccaagcagagacggcaggcatcgcccaacttcactgcccgcctggggagcagg
gtgctgtacccgaaatatggaggtgtggacagagggtgtctggatagacatctgatattt
agcaggtttcgtccgatgtcagtcttccacgaaggcgacggagacgagagcggtttcacc
tgttgtgccttctcagcccgcgagcgtttcctgatgctgggaacctgcaacggtcacctc
aaattctacaatgtcttctctggagaggaggaggccaactacacctgccacacatcagcc
atcacacacctcgaaccctccagggatgggaaattgctgcttacctctgcctcctggagc
gtgcccctgtcggccctctggagtatggacggcgtcttcagcgtgaaaaactcatttgta
gatgaccactacgttgagttcagtaaactctctcaggaccgagtcatcggcaccaaggac
caagttgcacatatctacgatatccagacgggtcagaagactctgaccctgaacgacccc
gctctggccaataactacaagaggaactgtgccaccttcaatcccaccgacgacctggtg
ctaaatgacggggtgctgtgggatgtgcgggcgtcaagggccatccataagttcgacaag
ttcaacatgaacatcagtggagttttccatcccaacggcctggaggtcatcatcaacact
gagatctgggacctgaggacctttcacctcctgcacactgtccccgccctggaccagtgc
agggtggtcttcaacagcaacgccaccattatgtacggagcaatgctgcaagctgatgat
gaggatgatgccatggaccagcagatgaagagtccctttggttcgtccttcagaaccttc
gatgccaccgactacaagcccattgccacggtggacgtaaagaggaacatctttgacctg
tgcactgacaccaaggactgctacctggctgtcattgagaaccaggacacagtgagcctg
gacaccgtgtgtcgtctgtatgaggtgggacgacagaaactggctgaggagggagacgat
gacgatcaggatgaagaccaggatgatgatgattcttcagactcagatgacgatgatgat
gatgatgacgatgatatggacacagacccgctcatagaggaactggccaataatgacgac
ccagaaaacgaggaccgagccgactctcccacagacgaagagattgctcgtctccttggc
agcaacagtgacgacgacaacaacggcgacaacgatgatgatgaatcggacgactcggac
aattcgtacagaagtgatgacggatctgattcatttgaccctgaaaacccttactaccca
gagccatcggatgatgaggacgcccggctgcttgagtccctccatgaccgatggttctcc
tga
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integrated database retrieval system
