KEGG   Lates calcarifer (barramundi perch): 108889777
Entry
108889777         CDS       T04895                                 
Symbol
cpne1
Name
(RefSeq) copine-1 isoform X1
  KO
K24526  RNA-binding protein 12
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lcf03041]
    108889777 (cpne1)
Spliceosome [BR:lcf03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    108889777 (cpne1)
SSDB
Motif
Pfam: RRM_1 RRM_3
Other DBs
NCBI-GeneID: 108889777
NCBI-ProteinID: XP_018541918
UniProt: A0A4W6CCS7
LinkDB
Position
LG12:4986506..5011423
AA seq 902 aa
MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGEHGEAFIVFATDEDARLGMMRT
GGSIKGSKVSLLLSSKTEMQNMIELSRRRFEAGAGAVEAAAPPAGNANRQAGAAPIPTVQ
AGPGGRSGSHGNQGFSNTSASVTAASSAQEPPSNKAAASLASVVPCFPNSYSSAPTITTA
LASLNAGPPPIPPLPSMPSMPPMPTLPTIPVPPPVSSLPPVPTVSPLSQGPPVPPMSHLP
HMSSLPPFNPSLPPPAGLGSGLPLGTPNPMLFNPLSPLASLGLQAHMKAAAAAATGAVNP
DELFVLLQNLPFSCSEMEVREFFRGLGVDGVRLLRDGQGRPTGRAIIKFFSPQDSFEAVK
RGGGMMGQRFIEIAPASERQWASLNDGATGHAPHNSSKSNNSNESQDQQHRRGNAGTGGR
DQRGRSRSPHRQEFCVYLKGLPYEADKKQIKEFFKNLAIVEDTIYIAYGPNGRATGEGFL
EFKTEQDYKTALGAHMQYMGTRFIQVHPISRKGMLEKIDTIRKREAAQGDGKNQDGMKTP
RNCAHITNIPYNVSKKDVRAFLEGVGLYEDTLKVLTDSHGNGLGQAIFQLRTEEDARKAE
RLHRQKLNGRDAFVHLVTFDQMKEIERNPPPQNKRGQRNQNQNQQNQIQNQHQQTQPSPQ
QPQINPFAGISGEEFNFLRNTMGNLNSAPFMTPFSAPGNGLAGPPPLPPLAAGLGDVNLG
VAPPLVAGLPGAPILEPPGFRPGAGGGAPFSQDGLRGLVPFDSANRKGGGGGQNRAGGAN
NNQGRPGGGATGGQQVFTPGADGLRNQPAPGASNNPNSQRGAAGPTIVKLQNMPFTVTVD
EIMDFFYGYQVLPGSVCLQFSEKGLPTGEAMVAFQSHEEAAAAVMDLNDRPIGARKVKIS
LG
NT seq 2709 nt   +upstreamnt  +downstreamnt
atggcggtagtcatcagactgcagggtctgcccatagtggccggcaccatggacatcaga
cacttcttctctggcctcaccatccctgacgggggagtgcacatcgtggggggtgagcat
ggcgaggccttcatcgtctttgccactgacgaagacgctcggctggggatgatgcgtaca
ggcgggtccataaagggctccaaagtgtcgctgttgcttagcagcaagacagagatgcag
aacatgattgaactcagccgccgcaggtttgaggctggcgcaggtgctgttgaagcggct
gcacctccagcaggaaatgctaaccgacaagctggtgcggcccctatacccacagtgcag
gcaggaccaggggggagaagtggcagccatggaaaccagggtttcagtaacacctcagcc
tcagtgacggcagcaagctcagctcaggagccaccaagcaacaaggcagcagctagcttg
gccagtgtggtgccctgcttccccaacagctacagctctgcacccacaatcaccacagca
ctggcgtctctcaatgcaggccccccacccatccctccacttcccagcatgccttccatg
ccccctatgcccacgctgcccaccattccagttcctcctccagtgtcctccctccctcct
gtccccactgtctctcccttgtctcaaggacctccagtgcctcctatgtcccacctcccc
cacatgtcctctctgcctcccttcaacccctccctacctcccccagcaggactgggctct
ggcctccctcttggaacccccaaccccatgctgtttaatcctctctcccctctggcctct
cttggccttcaggcccatatgaaggctgctgctgctgcagccacaggagcagttaatccc
gatgagttgtttgtccttctacagaacctcccgttctcctgctcagagatggaagtcagg
gagttttttcgggggctgggcgtggacggggttcgtctgctgagagatgggcagggtcgg
ccaactggcagggctattatcaagttcttctcgccacaggacagctttgaagctgtgaag
cggggagggggtatgatgggccaaaggtttattgagatcgccccagcctctgagcggcag
tgggccagcctcaatgacggcgcaacaggccatgctcctcacaatagcagtaaatcgaat
aacagcaatgagtcacaggaccagcagcaccgccgtggtaacgctgggacaggaggcagg
gatcagcgaggaaggtcaagatctccccatcgacaggagttctgtgtctacctgaagggt
cttccctatgaggctgacaagaaacagattaaggagttctttaagaatttggctattgtg
gaggacaccatctacattgcttatgggccgaatgggcgagccacaggagagggcttcctt
gaattcaaaacagaacaggactacaagactgctctgggtgctcatatgcagtacatgggc
acccgattcatccaggtccacccaatcagccggaagggaatgcttgaaaagattgacacc
atccgcaaacgtgaagcagctcagggtgatggcaagaaccaggatggtatgaaaactccc
aggaactgtgcccacatcaccaacatcccttacaacgtctccaagaaggatgtccgtgcc
ttcttggagggtgtggggctttacgaggacaccctgaaggttctgacagatagccatggc
aatggtttagggcaagctatcttccaactgcggactgaggaagacgctcgcaaagctgag
agactgcatcgtcaaaaactcaatggccgtgatgcctttgtccacctggtgacctttgac
caaatgaaggaaattgagaggaatcctcctccccagaacaagaggggtcaacgcaaccag
aatcagaaccagcagaaccaaattcagaatcagcaccagcaaacccagccaagtccacag
cagccccagatcaacccatttgctgggattagtggggaggagtttaattttctcagaaac
acaatgggcaatctcaatagtgcaccttttatgactccgttttcagcaccaggaaatgga
ctggcgggccctcctcctctgcctcctctggcagcgggcctgggggatgtgaatctgggc
gtggctcctccactagttgctggtcttcctggagctccaatcctggagccaccaggcttt
cgtcctggtgctgggggaggagctccatttagtcaggatgggctgagaggcttggtgccc
tttgacagtgccaacagaaaaggaggtggaggaggacagaaccgggcaggaggagctaac
aataaccaaggacgtccagggggtggggctactggtggacagcaggtgttcactccagga
gctgacggtcttcgtaaccagccagcccctggagcatccaacaatcccaatagtcaacgt
ggtgccgccggcccgacaattgtaaaacttcagaacatgccgttcactgtgaccgtggac
gaaatcatggacttcttctacggctaccaggtgctgccaggctcagtctgcctgcaattc
agtgagaaaggcctgccaactggtgaggccatggtggccttccagagccacgaggaggct
gctgccgccgtcatggaccttaatgaccggcctattggcgcccggaaggtcaaaataagc
ctgggttaa

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