Lates calcarifer (barramundi perch): 108889825
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Entry
108889825 CDS
T04895
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03430
Mismatch repair
lcf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108889825
03460 Fanconi anemia pathway
108889825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108889825
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
108889825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
108889825
NCBI-ProteinID:
XP_018541998
UniProt:
A0AAJ7PYK2
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Position
LG16_LG22:2239239..2244447
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AA seq
736 aa
AA seq
DB search
MAGVIRRLDETVVNRIAAGEVIQRPANAVKEMIENCLDAKSTSIQVTVKDGGLKLLQIQD
NGTGIRKEDMDIVCERFTTSKLQTFEDLSAIATYGFRGEALASISHVAHVTITTKTADAK
CAYRASYSDGKLKGPPKPCAGNQGTQILVEDLFYNVSTRRKALKSPSDEYSRIVEVVSRY
AIHNSGKSFSVKKQGETVADVRTLPNASAVDNIRGVFGNAVSRELIEVGCEDQKLAYKMK
GYISNANYSVKKCILILFINHRLVESSALKKAIETVYAAYLPKNTHPFLYLSLEIAPQNV
DVNVHPTKHEVHFLHEDSVIESVQKHIESKLLGSNSSRTYFTQTLLPGLSVSGGTEVKSS
TTAADSTERVYAHQMVRTDCRAQKLDAFLQPKEKPPPDPEPAGPSGREAATKPTGPDSVE
MDDTDDADLLEALAQQEAEEESSVSAHDVQRKRPRKEQQLDEEEEEAEVEEEEELTAAAT
PKRRVIKLTSIKELRTEITENTHKGLQEMLQKHSFVGCVNPQWTLIQHHTKLYLLNTTKL
SQELFYQILIYDFGNFGVLRLSTPAPLYDLAMLALDSEESGWTEEDGPKEGLAQYIVDFL
TKKAEMLGDYFSLEIDQEGNLTGLPLLLDKYTPIMEGLPMFILRLATEVNWDSERECFRD
FSKECSMFYSIRKQYVLEAEPGEEQDGEANSWRWKVEHVIFKAFRTLFSPPKNFSEDGTV
LQIANLPDLYKVFERC
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagttatccggagactcgacgagactgttgtcaaccggattgctgcgggagaa
gttatccagcgtcctgccaacgccgtgaaagagatgattgaaaactgcttagatgccaag
tccacgagcattcaggtgacggtgaaggacggcggactgaagctccttcagatccaggac
aatggcaccggcatcaggaaagaggatatggatatcgtctgtgagcgtttcaccaccagc
aaactccagacgtttgaggatctctcagctattgcaacctacggatttagaggagaggcc
cttgcgagtatcagccatgtcgcacacgtgaccattacgacaaagacagctgatgccaaa
tgcgcctacagggccagctacagcgatggcaaactgaaaggtcctcccaaaccctgcgct
ggcaaccaggggacacagattcttgtggaggacctcttctataacgtgtccaccaggagg
aaagctttaaagagccccagtgatgagtactccaggattgtagaagtggtcagcaggtac
gccatacacaactcaggaaaaagtttttctgtgaaaaagcaaggagagactgtggcagat
gtgaggactctacccaacgcatctgcagtggataacattcgaggagtgtttggcaatgca
gtcagcagggagctgatcgaagtcggctgcgaggatcagaagcttgcgtataagatgaaa
ggctacatctccaatgcaaactactcggtcaagaaatgcatcctgatcctgttcatcaac
catcgtctggtggagtcgagcgctttgaagaaggcgatcgagacggtttacgctgcgtac
cttcccaagaacacacaccctttcctttacctcagcttagagatcgccccgcagaacgta
gacgtgaacgttcaccccacaaaacatgaggtgcatttcctgcatgaggacagcgtcatc
gagagcgttcagaagcacatcgagagcaaactgctgggctccaactcctctcgcacgtat
ttcactcaaacgttgctgccggggctgtcggtctcaggtggcactgaagtcaagtcctcc
accaccgcagctgattctactgagcgagtctacgcacatcagatggtgagaaccgactgc
cgcgctcagaagctggacgccttcctccagccgaaagaaaaaccgcctcctgaccccgaa
ccagctggacccagcggcagagaggctgcgaccaaacccaccgggcccgacagcgtggag
atggacgacacagacgatgcagatctgctggaggccctggctcagcaggaggcagaggag
gagagcagcgtcagcgctcacgatgttcagaggaagcgtccgaggaaggagcagcagctg
gacgaggaggaagaggaggctgaggtggaggaggaagaggagctgacggctgcagctacg
cccaagagacgagtcataaaactgaccagcatcaaagagctgaggactgagatcactgag
aacacgcacaaaggtcttcaggaaatgctgcagaaacactcgttcgtgggctgcgtcaac
ccccagtggactctgatccagcatcacaccaagctgtacctgctcaacaccactaagctc
agtcaggagcttttctaccagatcctcatctacgactttgggaacttcggcgtactcaga
ctgtctactccggctccgctctacgacctggccatgttggctctggactccgaggagagt
ggctggaccgaagaggatggacccaaagagggactggctcagtacatagtggacttcctg
acgaagaaagcagagatgctgggggactacttctccctggagatagaccaggagggaaat
ctgacaggactgccgctgcttctcgacaagtacacccccatcatggaaggtctccccatg
ttcatcctgcgcctggccactgaggtgaactgggacagcgagagggagtgtttcagagac
ttcagcaaggagtgcagcatgttctactccatcaggaagcagtacgtcctggaggccgag
ccgggagaggagcaggatggagaggcgaactcgtggcgttggaaagtggagcacgtcatc
ttcaaagctttccgaactctcttcagcccgccgaagaacttcagcgaggatggcacggtg
ctgcagatcgccaacttacctgacctgtataaagtgtttgagaggtgctga
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