Lates calcarifer (barramundi perch): 108889843
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Entry
108889843 CDS
T04895
Symbol
tcea3
Name
(RefSeq) transcription elongation factor A protein 3 isoform X1
KO
K03145
transcription elongation factor S-II
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcf03021
]
108889843 (tcea3)
Transcription machinery [BR:
lcf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
108889843 (tcea3)
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GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
Motif
Other DBs
NCBI-GeneID:
108889843
NCBI-ProteinID:
XP_018542027
UniProt:
A0AAJ7V9I5
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Position
LG15:complement(23625837..23635423)
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AA seq
780 aa
AA seq
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MTREEDLIRIAKKLDKMVSRNNTEGAMDLLRELKGFNMTLKLLQETRIGMSVNGIRKHCT
DEEVIALAKVLIKDWKRLLDSRHSHSEKPAEMKNGLDSGKTASASPNRSPSETRSSHRRL
DVKPKHDSDPDKTQSDNSRKEKHNDEDKNKKRPTDDLGDEKRPEEPQSEQHPQEIRKEKH
LEEPKKQRALEDPQLEIDNKKQKHVQDLQSERHKPELRKERPLEELKKMRHVEELKKEKH
PEEPKKHSYGDEAKKDKHKEESRHERPVNAPQRERPQSEPQKERPADVHKPIFERRGVLD
SSILYPTRFPSPPRPARPPLPIKRPSLDVKKDRVPAVHGACCDGSVRKDCRDSSSQHPRT
HAARPASPPAKQHRPSLEVKKESMRKVPPDPNAPIAPLPLHLHPPPPRKEPPDPNAPLPP
LPLHLHPPPPPPKRLSQDGKKEKESRKESLDSKPSSQKKTSDHVKKDRKDSSDSKVSNKH
SDEAKRERKDSSDSKPPPPKKPSLDVKKEKHRKDSCDSKPGQPVKRHSTDSKVDRRESTD
SKKSSLLPAKKLTGERRDSQGSKTLQPGPPQRKPSTDSIERKGKIDTPKTPTTPTSPMSP
GFSSAGGPLSPHLATGDSIRDKCIEMLAAALRTDNDYRDFGANCDSMAAEIEDHIYQEIK
ATDMKYKNRVRSRISNLKDPKNPGLRRNVLAGSIELSRIATMSAEEMASDELKQLRNVLT
QEAIREHQMAKTGGTTTDLLQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgacccgagaagaagacctcatccggattgcaaagaaactggacaagatggtgtctaga
aataacacggagggagccatggacctgctgagagaactgaaaggtttcaatatgacactc
aaacttctccaggaaacgaggattggcatgtctgttaacggtatcaggaagcactgcaca
gatgaggaagtcattgctttggcaaaggtcctcattaaagactggaaaagacttctggac
tctaggcattctcactctgagaaaccggctgaaatgaagaatgggctggactccggcaaa
acagcatcagcgtctccgaaccgctctccctccgagacacgcagcagtcacaggagactg
gatgtcaaaccgaaacatgactcagatcctgacaaaacacagtctgataacagcagaaaa
gagaaacataacgacgaggacaaaaacaaaaagagacccacggatgaccttggggatgaa
aagcgcccggaggagccccaaagtgagcaacatccgcaagaaatcagaaaagaaaagcat
ttggaagaacccaaaaaacaaagagccttggaggatccccaattggagatagataacaag
aaacagaagcatgtacaagacctgcagagtgaaagacacaagccagagctgaggaaagaa
aggcccttagaggaactgaaaaagatgagacatgtggaagaactcaaaaaggaaaaacat
cccgaggagcccaagaagcacagctacggagatgaggccaagaaggacaagcacaaagaa
gaaagcagacatgagaggccggtaaacgcaccgcaacgagagaggccgcagagtgaaccc
cagaaagagagaccggctgatgttcacaagccaatatttgaaaggagaggagtcttggac
agcagcattctgtatcccacccggttcccctctcctcctcgacccgctcggccccctctc
ccgatcaaacgcccctctctggacgtgaagaaagacagggtacctgctgtgcatggtgca
tgctgtgatggctcagtaaggaaggattgtagagactcttcctcccaacatcctcgtacc
cacgcagcccgaccagcctctcctccggctaagcagcaccggccgtcactggaagtaaag
aaggagagcatgaggaaagttccgccagacccaaatgctccaatagctcctctccctctt
caccttcatcctcctccgccaagaaaagagcctcctgaccccaacgcccccctcccgccg
ctccctctccacctccaccccccgccgcctcctccaaagcgtctctcgcaggacgggaaa
aaggagaaagagagcaggaaggagtcactggactcgaaaccgtcttcacagaagaagacg
tcagatcatgtgaagaaagacaggaaagactcgtcagatagcaaagtgtctaacaaacac
tccgatgaagccaagagagaaaggaaagattcctctgactctaaaccgccacctcccaaa
aagcccagtttggatgtcaaaaaagaaaaacacaggaaggactcctgcgactcaaagcct
ggtcagcctgttaaacgtcattcaactgactccaaagttgacagacgggaatccactgat
tcaaagaaaagcagcttgctaccagcaaagaagctaacaggtgaaaggagagactctcag
ggctctaagaccttgcagcctggacctccacagaggaagccctcgactgatagcattgaa
agaaagggaaagattgacacccccaaaactcccaccaccccaaccagccccatgtcgcct
ggcttcagttctgccggcgggccactgtcccctcacctggctactggagactccatcagg
gacaagtgcattgagatgctggcagctgccctgcgcacagacaacgactacagagatttc
ggagctaactgcgacagcatggcggcagagattgaagatcatatctaccaggagataaag
gccactgacatgaaatataagaacagagtccgcagccgcatcagcaacttgaaggatccc
aagaaccctgggcttcgcagaaatgtactggcggggagcattgagttgagccgcattgcc
accatgtctgctgaggaaatggccagcgatgagctgaaacagctgaggaacgttctcacc
caggaggccatcagggagcaccagatggccaagactggtggcaccaccactgacctgctg
cagtgcggcaagtgcaagaagaagaactgcacctacaaccaggtgcagacacgcagtgct
gatgagccgatgaccacatttgtcctgtgtaatgaatgtggtaaccgctggaagttctgc
tga
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