Lates calcarifer (barramundi perch): 108889844
Help
Entry
108889844 CDS
T04895
Name
(RefSeq) protein transport protein Sec61 subunit alpha-like 1
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03060
Protein export
lcf04141
Protein processing in endoplasmic reticulum
lcf04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
108889844
04141 Protein processing in endoplasmic reticulum
108889844
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108889844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108889844
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lcf02044
]
108889844
Membrane trafficking [BR:
lcf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
108889844
Secretion system [BR:
lcf02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
108889844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Plug_translocon
DUF2975
Motif
Other DBs
NCBI-GeneID:
108889844
NCBI-ProteinID:
XP_018542017
UniProt:
A0AAJ7PYK3
LinkDB
All DBs
Position
LG12:complement(22072043..22078021)
Genome browser
AA seq
476 aa
AA seq
DB search
MGIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD
PFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG
MIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS
LFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLP
NLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSN
LYVISQMLSTRFSGNFLVNLLGTWSDTSSGGPARAYPVGGLCYYLSPPESFGSVLEDPVH
ALIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTA
AAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQSEVGSMGALLF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcaaattcttggaggtgataaaaccattctgtgcagtgctgccagagatccaa
aaacccgagagaaagatccagttcagagaaaaagtattatggactgccatcactctcttc
attttcctggtgtgctgccagatccctctctttggcatcatgtcctcagactctgcagat
ccattctactggatgagagtgattctggcctcaaacagaggtacgctgatggagctcggt
atctcaccaattgtcacctcaggcctgataatgcagctgctggctggagctaagatcatt
gaagttggagacacaccaaaggacagagcactcttcaatggagctcagaaattgtttgga
atgatcatcaccattggccaggccatcgtatatgtgatgaccggcatgtatggagatccc
tcagagatgggtgctggaatctgtttgctcatcatcattcagctgtttgtagctggactg
attgtgctgctgctggatgagttgctccaaaagggctatggtctcggttcagggatctca
ctgttcattgctaccaacatctgcgagacgattgtgtggaaggccttcagccccacaact
gtgaacactggaagaggtactgagtttgagggagcgatcattgctcttttccatctgctg
gcgactcggacagacaaagtgcgtgcactgagagaggccttctacagacagaacctgccc
aacctcatgaacctcatcgccacagtgtttgtctttgctgtagtgatatactttcaggga
ttcagggtggatctgcctatcaagtcagctcgctaccgtggccagtacaacacctaccca
atcaagctcttctacacctccaacattcccatcatcctgcagtccgccttggtctccaac
ttgtacgttatctcccagatgctctccacacgcttcagtggcaatttcctggttaatctg
cttggaacttggtctgacacatcgtcaggtggtccagctcgtgcctaccccgttggtgga
ctctgttactacctctccccccctgagtcatttggatctgttctagaggacccagtccac
gcactcatctacatcgtcttcatgctcggatcatgtgcctttttctccaaaacttggatt
gaagtctctggctcctctgccaaagatgtggccaaacagctgaaggagcagcagatggtg
atgaggggacacagagagacctcaatggtccatgaactgaacaggtacattcccactgct
gctgcctttggtggactgtgtattggtggtttatcagtgatggcagacttcctcggagcc
attggctctggtactggtatcctgctggccgtcaccatcatctaccagtactttgagatc
tttgtgaaagaacagagtgaagtaggcagcatgggggccctgctcttctag
DBGET
integrated database retrieval system
