Lates calcarifer (barramundi perch): 108889968
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Entry
108889968 CDS
T04895
Name
(RefSeq) macrophage-stimulating protein receptor isoform X1
KO
K05100
macrophage-stimulating 1 receptor [EC:
2.7.10.1
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108889968
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcf01001
]
108889968
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lcf04090
]
108889968
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
108889968
Protein kinases [BR:
lcf01001
]
Receptor tyrosine kinases (RTK)
MET family
108889968
CD molecules [BR:
lcf04090
]
Proteins
108889968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
TIG
Sema
PSI
Kinase-like
Pkinase_fungal
Myc_target_1
Motif
Other DBs
NCBI-GeneID:
108889968
NCBI-ProteinID:
XP_018542200
UniProt:
A0A4W6CZD3
LinkDB
All DBs
Position
LG12:24890006..24904744
Genome browser
AA seq
1377 aa
AA seq
DB search
MVTWAALLTVCIWIQTRVASGQHACPPAPHGEVDFTVNYSLPYFQSENPIQNIEVHWGTH
QPDVYVGCQNVIVAVNYTMQKVWEVRTGPVGSPECETCQACHIETDPGDPVNTDNEVLLL
DPAGFLLPYLYICGSTQHGICYFINIESQQHEPQCLYKKEDNFPSYCRDCLASPLGTKVT
IIEDGATSYFFVASSVNEKVAHTYPRRSISVVRPLSTEDGFHMVMKGLTVLPSLQNSYKI
NYIYSFSTKDFVYFVSLQREDPFKSNSAFQTRLGRLPISIPEVWMYREVVLECRFEPKRR
RRRSDGFIRDTVYNGLQAAYFGQAGKNLAAELGVDKREDILYGVFAEVDENGQPQKNSAL
CAFPLSNVNHAIDKGVEACCKSGTEQLSRGLCHFQPCESCPHENSEGNDTCSTMPTLVSA
PHYRVDLFNSKMSNVLLTAVLVTTIGDYTLGHFGTSDGRILQVILTTHELKVFANYSLGE
TAVSRTAAVYSQDSLLFVVGNKMFRVPSAGPGCAHFRTCSKCLTAPRFMNCGWCSEICSR
QDECTSQWNKDSCAPVITEFFPKMAPAGGETELTLCGWDFQSPQRPAIISGKTHIVTVGT
GNVCVVLPGKSSSKVLVCKIQEKRPNQNLSIILEVHEGKVEGHYSIEGTAQMPGFSFVEP
SITEIRPDNGPVFGGTTVTLTGRYLNSGIQRDVFFDNKKCTVQSAPEGNETLSSIVCQTA
AAAGVGKVPVKVTIDGFKVIANKMFSYKKNPVITSVLPRCSFSSGSKLVIEGQNLDSAHK
TVLQYTSKNPLMPSLQQVCNGTANATHMECWAPAFQEEMPEEKSDIGVISIHMDGQKDLW
EKRFDYHPDAKVIPFENDDKELLLKPGETEVSLHHNKLNTVSKCMKIKMTIGGVDCNVQV
LLNELTCRIPKGLVVPSEGSPVKVFVNGEEFDVGTVVYYDNKTAIAGIVLGIIAALVLGA
TLALVVMIHLRKKKRASIENRLSTMISRNRMSSNPDFSPTGDYRRVDLSSQTSGSGGMAF
QGLLYAASYDHLAIPLVPRDNISVVSLSSDLLEEVKDVLIPAEMLRIEDSQIIGKGHFGT
VYHGYLIDSNKQETHCAVKSLNRITDLGEVDQFLREGIIMKGFHHPNILSLLGIMLPKEG
LPLVVLPYMKHGDVRHFIRSEKRNPTVKDLIGFGLQVAKGMEYLAQKKFVHRDLAARNCM
LDETFTVKVADFGMARDIYDKEYYSVQDHKRAKLPVKWMAIESLQTQKFTTKSDVWSYGI
LMWELLTRGANPYPDVDPYDITHYLLKGRRLAQPQFCPDTLYSIMLTCWDPEPECRPSFH
SLVSEVQHILSCLEGEHYISLKVTYVNLDQPRPYPSLTGSADEAEASDLDADCHAAS
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgtgggctgctttgctgacagtatgcatatggatacaaacacgagttgcctca
ggacagcacgcatgtcctcctgctcctcacggagaggtggatttcactgtaaattactcc
ctcccctacttccaatcggagaatcccatacagaacatagaggtgcactggggaacgcat
cagccagatgtgtacgttggatgccagaatgtaatagtggcagtcaactatacaatgcag
aaagtatgggaagtgagaactggacctgttggcagtccagaatgtgaaacctgtcaggca
tgccacatagaaacagatccaggggatccagtgaatacagacaacgaggttctgcttttg
gatcctgctggatttcttttaccatacttgtacatttgtgggagcactcagcatgggatc
tgttacttcattaatattgaatctcaacagcatgagcctcagtgtttatacaaaaaagag
gacaactttccatcctactgtcgtgactgtctggccagcccactcggcactaaagtcacc
atcattgaagatggagccacatcatacttctttgtagcatcctctgtcaatgagaaagtg
gcgcatacgtatcccaggaggtcgatatcggtggtgaggccactctcaactgaagatggc
tttcatatggtcatgaagggcctgacagtgctccccagtctccagaactcttacaagatt
aattacatctacagcttctctaccaaggacttcgtctacttcgtctccctgcagagggaa
gatcccttcaagagcaattcagcttttcagacccgtctgggacggctgccgatatccatc
cctgaggtgtggatgtacagagaggtggtcctggagtgccgcttcgaaccaaaacgcagg
aggagaaggagtgatggattcatcagggacactgtgtataacgggcttcaggcggcctac
tttgggcaagcagggaagaacttggctgccgagctgggggtggacaagagagaggatatt
ctgtatggggtgtttgctgaggtggatgagaacggtcaacctcaaaaaaactcagccctg
tgtgccttccctttgagtaacgtaaaccatgcaattgacaaaggcgtggaggcctgctgt
aagtcagggacagagcagctgtccagaggtctctgccacttccagccatgtgagagctgc
ccacatgaaaactctgaaggtaatgacacatgcagcaccatgcccaccctggtgtcagca
ccgcactacagagttgacctcttcaatagcaagatgagcaatgtcctgctcactgctgta
ctggtcaccactattggggattacacactgggccactttggtacctcagatggcaggata
ctgcaggtgattcttaccacgcacgagctcaaggtttttgccaactactctctgggagag
accgcagtatccaggacagcagctgtgtactcccaggattcacttctctttgtagttggc
aataagatgttcagggtgccctctgcgggtccagggtgcgcacatttcaggacatgctcc
aagtgtttgacggctccacgcttcatgaactgcggctggtgttcagaaatctgctcgagg
caggatgagtgtacctcgcagtggaacaaagactcctgtgcacctgtcataacagagttc
ttcccgaaaatggcacctgctggcggtgagacggagctgacgttgtgcggctgggatttc
cagtcccctcagcgaccagccatcatcagcggcaagacccacattgtcacggtgggcacc
gggaacgtgtgcgttgtcctgcctgggaagagcagtagtaaagtgctagtgtgcaagatt
caggaaaaaagaccaaaccagaaccttagcatcattttggaagtgcacgaggggaaagtg
gaaggccactactcaatcgaaggcacggctcagatgcctggcttctcttttgtggagcct
agcataacagaaatcaggcctgacaatgggcctgtgtttggaggaacaacagtcacactg
acgggcaggtatctgaactctgggatacagcgagacgtcttcttcgataacaaaaagtgt
accgttcaaagtgctcctgaaggaaatgagactttatcctcaatcgtctgccaaacagca
gctgcagcaggcgttgggaaggtcccagtgaaagtcaccattgacggcttcaaagtgatt
gccaataagatgttctcttacaagaaaaaccccgttataacctctgtgcttcctcgttgc
agtttcagcagtggctccaagctggtgatagaaggtcagaatcttgactctgcccacaaa
actgtgcttcagtacacttccaaaaatcccctcatgccatctcttcaacaagtctgcaac
ggcacagcaaatgccacgcacatggaatgctgggcccctgcttttcaagaggaaatgcca
gaggagaagtctgacatcggagtgatctctattcacatggatggacaaaaagacctctgg
gagaaacgttttgattaccaccctgatgccaaagtcattccctttgaaaatgatgacaaa
gaattacttctaaagccaggagagacagaagtctcactgcatcataacaaactgaataca
gtaagcaaatgtatgaagatcaagatgaccattggcggtgtggactgcaacgttcaggtt
ctgctaaatgagctgacgtgcaggattcctaaaggcctggttgtccccagtgagggatca
cctgtcaaggtgtttgtgaacggggaagaatttgacgttggtactgtagtgtattacgac
aacaagactgcgattgcaggcattgtgctgggcatcattgctgcactggtattaggtgct
acccttgcattggttgtaatgatccatttaaggaagaaaaagagagccagcatagagaac
cgtttatcaacaatgatttcacggaaccgcatgagcagcaaccctgatttctcaccaaca
ggtgactacaggcgagtggatctgtccagtcaaacatcaggatcaggaggaatggccttc
caaggtttattatatgctgccagctatgatcatctggccattcctttagtgccacgggac
aatatctcagtggtcagcctgagctctgatctccttgaagaggtcaaagatgtgctgatc
cctgcagagatgctcagaattgaggatagtcagataattggcaaaggtcactttgggaca
gtttatcatggatacctgatagacagcaataagcaggagacccactgtgctgttaaatca
ctgaacaggatcacagatctgggggaggtggaccagttcctcagagaaggcatcatcatg
aaaggtttccaccacccaaacatactgtctctgctgggcatcatgctgcccaaagaaggg
ctccctctggtggtgctaccatatatgaagcatggggacgtgcgtcatttcattcgttct
gagaaaaggaacccgacagtgaaagacctgattggctttgggcttcaggttgccaagggg
atggagtatttagcccagaagaaatttgtccacagagacctggctgcacgtaactgcatg
ctggatgaaaccttcacagtaaaggtggctgatttcggcatggcgagggacatctatgac
aaggagtactacagcgtccaagaccacaaacgggcaaagctgccggtgaagtggatggcc
attgaaagcctgcaaacacagaagttcacgaccaagtctgatgtgtggtcatatggcatc
ttaatgtgggaactgttgaccagaggtgccaacccctatccagatgtggacccctatgac
atcacgcactacttgttaaagggacgtcggcttgcacagccccagttttgccccgacact
ctctattcaatcatgctgacatgttgggacccagagcctgagtgcagacctagcttccac
agcctggtttcagaagtgcaacacatcctgtcctgtctggaaggagagcactacatcagt
ctgaaggttacctacgtcaacttagaccagccaaggccttacccctcactgactggatct
gcagatgaggccgaggcctcagacttggacgcagattgtcacgctgccagctga
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integrated database retrieval system
