Lates calcarifer (barramundi perch): 108889969
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Entry
108889969 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin-like modifier-activating enzyme 1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108889969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108889969
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108889969
Enzymes [BR:
lcf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
108889969
Ubiquitin system [BR:
lcf04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
108889969
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108889969
Exosomal proteins of other body fluids (saliva and urine)
108889969
Exosomal proteins of colorectal cancer cells
108889969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_FCCH
E1_4HB
E1_UFD
Gln_amidase_like
Motif
Other DBs
NCBI-GeneID:
108889969
NCBI-ProteinID:
XP_018542202
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All DBs
Position
LG12:complement(24855582..24886428)
Genome browser
AA seq
1014 aa
AA seq
DB search
MENIGEIDEGFYSRQLYVLGHEAMQRMGTASVLIAGMRGLGVEIAKNVILSGVKSVTVQD
EGRTEWTDLSSQFFLRESHLGQNRATCSLQQLSALNPHVRVSAHTGPLDEDLLLQFEVVV
LTDSSLGDQKRFGELCHSHGIKFIVADTKGLCGQLFCDFGEAFEVLDQNGEMPASAMIQN
ISKGNPGVVVCTDDQKHGFSDGTKVSFSEIQGMTELNSIDPVEITVRGLHSFSIGDTSAF
SKYERGGVVTEVKQPCMLNFKPLSEALLNHELLKMNDFGKIIRHKTLHLAFQALHSFVKK
EQRLPGVRSQSDAEALLATVRELNAVAQLEQLDEDAVRNLSFTAQGDLAPMNAFIGGLAA
QEVIKACSRKFMPLQQWLYFDALECLPQDDQLGESSFSAKGTRYDGQIAVFGSAFQEKLE
RQKYFLVGAGAIGCELLKNFALIGLGAGEGGQITVTDMDFIERSNLNRQFLFRSQDIGKP
KSEIAAKAVREMNPQVNITAHQNRLDADSEGVYGYDFFTGLDGVAAALDNVEARVYLDGR
CIQHQKPMLEGGTLGSKCHTLVVVPHLTESYGPAKSSSNNAIPLCTLKNFPHRIEHTLQW
ARDQFEGLFKQTPENVNLFLRDAGFVERTLGHGDAEALEVLGGVWGSLEAMRTGGQRPAN
WEDCVSWARCKWETLYNNEIRQLLHCFPADQVTSTGLPFWSGSKRCPHPLTFDPNNTTHM
EYVVAAANLYGQIYGIKGTTDVASIRKILEKVHIPSFTPKSSVKIHVTDEEMQEDKKRGS
DDAEKARLEELKGKLASPSLKSSAMQMYPMDFEKDDDTNFHMDYIVAASNLRAENYDIPA
ADRHQSKRIAGRIIPAIATTTAAVAGLMCLELYKVVLGHKNISSYRTAYINLAVQYFVLS
QPSRPQQFQVAGKKYTLWDDFLVEGRRGDQQEMTLGDLLQYIKDKYNLNVCSLFYGTAFL
YSGQQERLQQSVSDVVRMVTKADIPPHKKMLELVPSFEEDEDCESVPPIRYLLP
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacatcggtgaaatcgatgaaggattctactcgagacagctatatgttctgggt
catgaggcgatgcagcggatgggcactgccagcgtcctcattgcaggcatgcgtggtctc
ggggtagaaattgccaagaatgtgatcctgtccggagtcaagtctgtcactgttcaggac
gagggtcgcacagagtggaccgacctgtcctcccagttcttcctgagggagtctcatctg
ggtcagaacagagccacatgttccctccagcagctgtcagccttaaacccacatgtgcgt
gtgtcagcacacactggaccactggatgaggacctgcttctgcaatttgaggtggtggtc
ctcactgactcctcactgggtgaccagaagcgttttggtgagctctgccattcacatggg
ataaagttcattgtggcagacaccaaaggactctgtggtcagttgttctgtgactttggg
gaggcgtttgaggtcttggaccagaatggagagatgcctgcatcagcaatgattcaaaat
atctctaaggggaatcctggagtggtggtctgcacagacgaccagaagcatggattctca
gacggcactaaagtttctttctctgaaattcaaggcatgacggagctcaacagcatcgac
cctgtggagatcacagtccgcggccttcactccttcagcattggtgacacttcagccttt
tccaagtatgaacggggtggagtagtgactgaggttaagcagccctgcatgctaaatttt
aaaccactgagtgaggctctgttgaatcatgaactcctgaaaatgaacgactttgggaaa
ataataaggcataagaccttgcacttggctttccaagctctccatagctttgtgaagaaa
gaacagcgactccctggtgtccggtctcagtcagatgcagaggccctgcttgccacagtg
agagagctgaatgcagtcgcacagctggaacagctggatgaagacgctgtgcgaaacctg
tccttcacggcccagggtgacttggctcctatgaatgctttcattggaggccttgctgcc
caagaagttattaaggcatgtagtaggaaatttatgccccttcagcagtggctatatttt
gatgcactggagtgcctccctcaagatgatcagctgggagagagctccttttcagcaaaa
ggcacaaggtacgatggacagattgctgtgtttgggtcagcgttccaggagaagcttgag
aggcagaagtatttcctggttggagctggtgctattggctgtgagcttctgaaaaacttt
gccctcattgggctcggtgcaggagaaggaggacaaatcactgtaaccgacatggacttc
atagaaagatccaacttgaaccgccagttcctgttcaggtctcaggatattgggaaaccc
aaatcagaaattgcagccaaagcagtgcgagagatgaacccacaggtcaacatcaccgct
caccagaatcgtctggatgctgacagtgaaggagtgtatggatatgacttcttcacaggt
cttgatggagtggctgcagccctcgacaatgtggaagccagggtctatcttgatggacgc
tgcattcaacaccagaagccgatgctggagggaggaactctaggaagcaaatgtcatact
ctggtggtggtgcctcacctgacagagtcttacggacctgccaaatcaagttctaataat
gccatcccgctctgcacactcaagaacttccctcaccgcatcgagcacactctgcagtgg
gccagagaccagtttgaaggactgttcaaacaaacacctgaaaatgtgaatctcttcctg
agggacgcagggtttgtagagcggactcttggccatggagacgctgaggccctggaggtt
ttagggggggtgtggggcagcctggaggccatgagaaccggaggacaacgtccagccaac
tgggaagactgtgtgagctgggcacgctgtaaatgggagactctttataacaatgaaatc
cgccagctgctgcactgtttccctgccgatcaggtgacctccactgggctgcccttttgg
tctggatcgaagagatgccctcacccactgacctttgacccaaacaatactacccatatg
gagtatgtggtggcagcagctaatctgtatgggcaaatctatgggatcaaagggacaaca
gatgttgcctctatcagaaaaatcttagagaaagtccacataccctctttcactcccaag
tcttcagtaaaaattcatgttactgacgaggagatgcaggaggacaaaaaaaggggaagt
gatgatgcagaaaaagctcgtcttgaggagttgaagggaaagttggcctcaccgtctctg
aaaagctcagccatgcagatgtaccccatggactttgagaaggatgacgacactaacttc
cacatggactacattgttgctgcctctaacctgagagcagagaactatgacatccccgca
gccgatcgccaccagagtaagcgcattgctggaaggatcatccccgccatagctaccaca
acagccgcagtggcaggcctgatgtgcctggagctgtacaaagtggtgctgggtcacaag
aatatcagctcttatcgcacagcttacatcaacctggctgtccagtactttgttctgtcc
cagcccagccggccccagcaattccaagtcgcaggaaagaaatacaccctgtgggatgac
ttccttgttgagggcagacgcggcgatcagcaggaaatgaccttgggcgatctgctccag
tatatcaaggataaatataacttgaacgtctgcagtctcttctacggaacagctttctta
tacagtgggcaacaggagaggcttcagcagagtgtgtctgatgtggtgagaatggtcacc
aaagcagacatccccccacacaagaagatgctggagttggtgccttcatttgaggaagat
gaggactgtgagtcggtcccacccatcaggtacctgctgccttga
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