Lates calcarifer (barramundi perch): 108890038
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Entry
108890038 CDS
T04895
Name
(RefSeq) photoreceptor outer segment membrane glycoprotein 2
KO
K17343
peripherin-2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108890038
Cilium and associated proteins [BR:
lcf03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
108890038
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GFIT
Motif
Pfam:
Tetraspanin
Motif
Other DBs
NCBI-GeneID:
108890038
NCBI-ProteinID:
XP_018542313
UniProt:
A0A4W6ELJ9
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Position
LG7_1:160051..165956
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AA seq
368 aa
AA seq
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MAVGKVTFTKAEREKLAEVLWLLNWISVVTGAILFGLGLFLKIEIQKWQEVMSDQGILYV
PHMLITTGLAACCINFLGGKICLDCADTNKFLRWKLVMMPYVVCTFFFTSCVLVGALMCY
SIRSQLEESLFLGLRNAMRYYKDTDTPGRCYLKRTLDLLQIQFHCCGNTGYRDWFQVQWI
SNRYLDMTSSTVVDRLRSNVEGKYLMDGVPFSCCSTFSPRPCIQQQVSNSSAHFNYDQQS
QQLNLWRRGCRQTLLDHYTGIMQSIGLTVLLIWLFELLVLTGVRYLQTAMENVLRLGDPE
SESDGWILENSLAETARSNFNIIKNLGKCYQIDDDPNINVPTATAEQEVPSQQVQIPVTS
IASRLRSH
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcggtaaggtgaccttcaccaaggcggagagagagaagctagccgaggtcctt
tggctgctcaactggatctctgtagtgacgggagcgatcctctttggcctcggcttattc
ctcaaaatcgagattcagaaatggcaggaagtgatgtcagaccaggggatcctgtatgta
ccacatatgctgatcaccacaggcctggcggcctgctgcatcaacttcctgggtgggaag
atctgtctggactgcgctgacaccaacaagttcctgcgctggaagctggtgatgatgccg
tacgtcgtctgcaccttcttcttcacctcctgcgtcctggtgggagcgctcatgtgctac
agcatccgcagtcagctggaggagtctctgttcctgggcctgaggaacgccatgcggtac
tacaaggacacggacacgccgggccgctgctacctgaagaggactctggacctgctgcag
atccagttccactgctgcggaaacaccgggtaccgggactggttccaggtccagtggatc
agcaaccgttacctggacatgaccagcagcaccgtggtggatcgtctgaggagtaacgtg
gaggggaagtacctgatggatggcgttcccttcagctgctgcagcaccttctcccctcgg
ccctgcatccagcagcaggtcagcaacagctccgcccacttcaactatgaccagcagagc
cagcaactgaacctgtggaggagaggctgccgacagaccctgctggaccactacactggc
atcatgcagtccatcggcctcaccgtgctcctcatctggctgtttgagctgctggttctg
acaggagtccgttacttgcagacggccatggagaatgttctccggctgggtgatccagag
tcagagtctgatggttggattctggaaaacagcctggcagagacggcccggtccaacttt
aacatcatcaagaacctggggaagtgttaccagattgacgatgacccgaacatcaatgtc
ccgaccgccactgctgagcaggaggtgccgtcccagcaggtccagatccctgtgaccagc
atagcatccagactgaggagtcactga
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