Lates calcarifer (barramundi perch): 108890059
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Entry
108890059 CDS
T04895
Name
(RefSeq) DNA repair protein XRCC3
KO
K10880
DNA-repair protein XRCC3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108890059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108890059
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
108890059
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rad51
AAA_25
ATPase
RecA
DnaB_C
AAA_22
ABC_tran
DUF7125
NACHT
Motif
Other DBs
NCBI-GeneID:
108890059
NCBI-ProteinID:
XP_018542349
UniProt:
A0AAJ7PZ25
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Position
LG7_1:complement(71543..74618)
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AA seq
340 aa
AA seq
DB search
MNWNQLELNPRIAATARRALKSVREVLCVSGPDLQRLTGLSRSDVQQLLAAAAAACRRHP
PVPALLLHGGQCRRFESGLRLSVGCPILDRLLRGGLPVGGVTELAGESGAGKTQLALQLC
LSVQYPQQHGGLDSGAVYICTEDSFPIRRLQQLIREQSSLRLDVPPSLINRLQFSDHVYI
EHAADLDSLQVCLSQRVPLLLARGLVRLLVVDSVAALFRSEFLTDDWLERNKQLLTLSST
LHHLSQEFTTPVLCINQVTDVFNSLDDSLGPPSSGLSPALGLAWANQVMVRLMMQRLQGT
ITRGNQSSSLRRLEVVFAPHLARDGQDAAVWREGVRGVDR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaactggaatcaactggaactgaacccgaggatcgcagccaccgcgaggagagccctg
aagtccgtcagggaggttttatgtgtctccggtccggacctgcagagactcaccggtctg
tcccgctctgacgtccagcagctgctcgccgccgccgccgccgcctgcagacgacaccct
ccagtcccagccctcctcctccatggcggacagtgtcgcaggttcgagtccggcctcaga
ctcagtgtgggctgtcccatcctagaccggctgcttagggggggtctgcctgtggggggt
gtcaccgagctcgctggagagagcggagcgggaaagactcagctggctctgcagctctgc
ctgtctgtacagtacccccagcagcacggagggctggactcaggagctgtgtatatctgc
actgaggactcgtttcccatcaggcgtctacagcagctgatcagagaacagtcgtctctt
cgccttgacgttcctccatcactgatcaacagactccagttcagtgaccacgtttacatc
gaacacgccgctgatctggactccctccaggtgtgtctgtcccagcgggtccccctcctt
ctggctcgtggtctggtccggctcctggtcgtggactcggtggcagctctgttcaggtct
gagttcctgactgatgattggctggaaaggaacaaacagctgctcaccttatcctccaca
ctgcaccacctgagccaggagttcaccacacctgtcctctgcatcaaccaggtcacagat
gttttcaactcattggacgacagtttgggtcctccgtcctctggcctgtcacctgctctg
gggttggcctgggccaatcaggtgatggtgcggttgatgatgcagcgtctccaggggacc
atcacccgtggcaaccagagcagctccctccgcaggctggaggtggtgttcgctcctcac
ctggcccgagatggacaagacgctgccgtgtggagggagggagtccgaggggtcgacaga
taa
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