Lates calcarifer (barramundi perch): 108890079
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Entry
108890079 CDS
T04895
Name
(RefSeq) TRAF3-interacting protein 1-like
KO
K19680
TRAF3-interacting protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108890079
Cilium and associated proteins [BR:
lcf03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
108890079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIP-T3_C
MIP-T3
CorA
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
108890079
NCBI-ProteinID:
XP_018542384
UniProt:
A0AAJ7PSY7
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MNAAVVKKTQDTLGKVIKKPPLTEKLLSKPPFRYLHDIFSEVIRTTGFMKGLYGENEMKS
DNVKDKDSKIAFLQKAIDVVMLVSGEPLAAKPARIVAGHEPEKTNELLQVIAKCCLNKMP
SDDAVKRVLAGEKVDMKTKASTSRSQDKENRGRERHLDREEKKKITERSGSRDQKDPDQP
KEQESRHRDGEKEHHRDRERSDKHHRSEQDRGKDRDKDKSRDRERDKDRDKGRVKDRDKE
KDRERDREREKDKEKDKDREKTRERDSHRDRERDKDKRRDRDKEREKERERHKEGEERNK
TVENGNSKARVSEEPQQTSSPDEPSKTAKPVPATDSPARIPRPSSAKGQRRRPKIGGQDE
SDSEGDGDAQSAQKPVPQENGDAAGSSGPSDVASSNRRFARPSSARPAPPRVKRQESYTD
VNSERLSSAKPSAPVIMDGKKLSEDEEDEDEQFLVEEAVPPPPDAPEMEVDPAQGLDSEE
KHGGLVKKILETKKDYELSPSSPKSKEQNSVSEAARKKERDMVRREIERLRSSIQTVCRS
SLPLGKIMDYIQEDMDAMQAELHTWRRENKEHAQALLQEQRATDRAVEPLKAELAELEQL
IKDQQDKICAVRSNILKNEEKIQKMVTGINFSSRT
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcggcagtggtcaaaaagacccaggacacgctgggcaaagtgataaagaaaccg
cctctcacggagaaactgcttagcaagcccccgtttcgatacctccacgacatcttcagt
gaggtcatcaggaccactgggtttatgaaagggctatatggagagaatgaaatgaagtca
gataatgttaaggataaggattctaagatagccttcctccagaaagccatagatgtcgtg
atgctggtgagtggtgagcccctggcagcaaagccagcacgcattgtggctggccatgag
cctgagaaaaccaatgagctcctgcaggtcatcgccaagtgctgcctcaacaagatgccc
agtgatgatgcagtgaagcgagtacttgcaggagaaaaggtggacatgaagaccaaggcc
agcacctccaggtcccaggacaaggagaatagaggacgtgagcgtcacctggatagagag
gagaagaagaaaattacagagcgcagcgggagccgggaccagaaggacccagaccagccc
aaagagcaggagagtcgccatagagatggggagaaagagcaccaccgggacagggaacgc
tctgacaagcaccaccgcagtgaacaggaccgtggcaaagaccgcgacaaagacaagagc
cgagaccgggagcgagacaaggatagagataaaggacgagttaaagacagggacaaggag
aaggacagagagagagatagagaaagggaaaaagacaaagagaaggataaagaccgggaa
aagacaagagagagagattcgcacagagaccgggaaagagacaaggacaaacgaagagac
agagacaaagagcgggagaaggagagagagcgacacaaagagggggaagagaggaacaaa
actgtagagaatggcaatagcaaggccagagtatcagaggaaccacagcaaacctccagc
cctgacgagcccagcaaaacagccaaacctgtgccagctactgacagtccagctagaata
cctcggccttcatctgccaaagggcagaggcggagacctaaaattggaggtcaagatgaa
tctgacagtgagggagatggagatgctcagtcagcccagaaacctgtccctcaggaaaat
ggagacgctgcaggctcctcaggtccatctgacgtggcttccagcaacagacgatttgcc
cgacccagcagtgctcgcccagcgcctcctcgagtcaagaggcaggagagttacactgat
gtgaactcagagagactgtcaagtgccaagccctcagcacctgtcatcatggatgggaag
aagctgtctgaggatgaggaggatgaagatgagcagttccttgtggaggaggctgtccct
ccacccccagatgctcctgagatggaggtggatcctgcacagggacttgacagtgaagag
aaacacggtggccttgtgaaaaagatccttgagaccaagaaagactatgaactgtcgcca
tcctcccccaaatctaaagagcagaactcggtgtctgaagcggcgcggaagaaagagcgg
gacatggtcaggagggagattgagcggctgcgttcgtccatccagacggtgtgccgcagc
tccctgcctctgggcaagatcatggactacatccaggaggacatggacgccatgcaggct
gaactgcacacctggcgacgggagaacaaggagcacgcacaggccttgctgcaggagcag
agagcgacagaccgggcagtggagcctcttaaagcagaactagctgagctggagcagctg
atcaaggaccagcaggacaagatttgtgctgtaaggtccaacatactgaagaacgaagag
aagatccagaagatggtgacaggaatcaacttctcctcaagaacctga
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