Lates calcarifer (barramundi perch): 108890168
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Entry
108890168 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor 1-like
KO
K05197
glutamate receptor 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
lcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108890168
04082 Neuroactive ligand signaling
108890168
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108890168
Ion channels [BR:
lcf04040
]
Ligand-gated channels
Glutamate (ionotropic)
108890168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
DUF2061
Motif
Other DBs
NCBI-GeneID:
108890168
NCBI-ProteinID:
XP_050923453
UniProt:
A0AAJ8B1A3
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
FPSLSGLSVLQRILDTAAERTWQVTSVNLDTLTEASFIKLLADLDYKKDYQIIIDCELDR
LNSILNLIAAQRRNLKNYHYILANLGFMDLNVTEFQKLGPNVTGFQLVNRSDPAVEKINQ
DWLDFDSKDLKLARRRLRYTGALTYDGVSVMATAFQNLRRQRIDISRRGNAGECLANPPA
PWGQGIDIQRALQQVRLEGLTGHVQFDERGHRTNYTLSVMELSHTGPRKIGYWNEKRGYV
NTAIYRPVVEEFYGLQNRTYIVTTILEAPYMMLKKNHEQFVGNDKYEGYCAELASEIAKH
VGFAYRLELVGDGKYGARDPETKMWNGMVGELVYGKADVAVAPLTITLVREQVIDFTKPF
MSLGISIMIKKPTKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWKGED
SDDEDETLPSSTSRRALPTSSSELTHSPGYSQGQNQNQNQQKEKETPEHTNDFGIFNSLW
FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED
LAKQTEIAYGTLDGGSTKEFFRRSKIAVFEKMWSYMRSADPSVFVKNTNEGVSRVRKSKG
KYAYLLESSMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSPLRNPVNLAVLKLNEQGL
LDKLKNRWWYDKGECGTGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALVEFCYKS
RIESRRMKELIDAAMMSTSLRGMAGGAGGGGGGGMAVMGGLGGGGASGLGGENGRVVAHD
FPKAGAQGLPCMSKAAGLGLSSTGM
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
tttccctccctctcaggcctgtcagtgctgcagaggatcttggacacggcggcggagcgg
acctggcaggtcacctccgttaacttggacactctgacagaagcgtccttcatcaagctg
ctcgccgacctcgactacaagaaggactatcagatcatcatcgactgcgagctcgaccga
ctcaactccatcctcaacctgattgctgctcagaggagaaacttgaagaactaccattac
atcctggccaatctgggtttcatggacctgaacgtcacagagtttcagaagctggggccg
aacgtgacgggcttccagctggtgaaccggtctgatccagctgtggagaagatcaaccag
gactggctggacttcgacagcaaagacctcaaactggctcgaaggaggctcaggtacaca
ggagctttgacctacgacggcgttagcgtcatggcgacggccttccagaacctgcggcgg
cagcggatcgacatctctcgccgcgggaacgcaggagagtgtctggccaatcccccggct
ccgtggggacagggcatcgacatccagagagccctgcagcaggtgcgtcttgaaggcttg
acgggtcacgttcagtttgatgagcgaggacatcgcaccaactacaccctgtctgtgatg
gagctcagccacactggacccaggaagatcggctactggaacgagaagagaggctatgtg
aacactgccatctacaggccagtggtggaggagttctacggtctgcagaacagaacctac
attgtcaccaccatactggaagctccatacatgatgttgaagaagaaccacgagcagttc
gtaggaaacgacaagtacgaaggttactgcgccgaactggcctcagagatcgccaaacac
gttggcttcgcctaccgcctcgagctggtgggtgacggcaagtacggtgccagagatcct
gagacgaagatgtggaacggcatggtgggagaactggtgtacgggaaagccgacgtggcg
gtcgccccgctcaccatcaccctggtccgagagcaggtgattgacttcaccaaacccttc
atgtctctgggaatctccatcatgatcaagaaacccaccaagtccaaaccgggcgtattc
tccttcctcgacccgctggcctacgagatctggatgtgcatcgtcttcgcctacattgga
gtcagcgtggtgctcttcctggtgagtcgtttcagtccttatgagtggaagggagaggac
tctgacgacgaagacgaaactctgccttcctctacctctcgacgagctctgccaacttca
tcctctgagctcacccactctccagggtactcccagggtcagaaccagaaccagaaccag
cagaaagaaaaggagactccagaacacaccaacgactttgggatctttaactctctctgg
ttctctctcggggccttcatgcagcagggctgtgacatctcccccaggtcactctcaggc
cgaatcgttggaggagtttggtggttttttaccctcatcatcatctcctcctacacagcc
aacctggcagccttcctcactgtagagaggatggtctcccccatagagagtgcagaggac
ctggccaagcagacagagattgcctacggtactctggacggaggctccactaaagagttc
ttcaggagatcaaagattgcagtttttgagaagatgtggtcgtatatgcggagcgcagac
ccatctgtgttcgtcaaaaacaccaatgaaggtgtgagtcgagtcagaaaatcaaagggg
aagtacgcctacctgctggagtcctccatgaacgagtacatcgagcagaggaagccctgc
gacaccatgaaagtaggaggtaacctggactctaaaggctacggagtggccacgcccaaa
ggatcgcctctcagaaaccctgttaacttggcagtgttaaaactgaacgagcagggcctg
ttggacaaattgaaaaacagatggtggtatgacaagggagagtgcggcaccgggggaggg
gactccaaggacaagacgagcgcgctcagtctgagcaacgtggcgggagtgttttacatt
ctgatcggcgggctggggctagccatgctcgtggctctggtcgagttctgctataagtca
cggatcgagtcgagaaggatgaaggagctgattgatgctgctatgatgagcaccagcctc
agggggatggcgggaggagcaggaggaggaggaggcggtggcatggcggtgatgggaggt
ttaggaggaggaggagcgtcgggactcggaggagagaacggtcgcgtggtggcgcacgat
ttcccaaaagccggagctcagggtttaccctgcatgagcaaggctgccgggctgggactg
tcctccacgggcatgtga
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integrated database retrieval system
