Lates calcarifer (barramundi perch): 108890364
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Entry
108890364 CDS
T04895
Name
(RefSeq) Golgi SNAP receptor complex member 1
KO
K08495
golgi SNAP receptor complex member 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108890364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108890364
Membrane trafficking [BR:
lcf04131
]
SNARE
SNAP-25[N] (Qb)
Gos1 (Gos28)
108890364
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
Sec20
DUF1664
Motif
Other DBs
NCBI-GeneID:
108890364
NCBI-ProteinID:
XP_018542743
UniProt:
A0A4W6DMZ8
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Position
LG21:complement(10213380..10235298)
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AA seq
248 aa
AA seq
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MAGIGSSNYWEDLRKQARQLENELDLKLVSFSKLCTSYSSSRDGHRGDTSDTTPLLNNST
QDRMFDTMSVEIEQLLAKLTAVNDKMAEYTNAPGTTSLNAALMHTLQRHRDILQDYTHEF
HKTKGNFLAIREREDLLGSVRKDIETYKSGSGVNNRRTELFLKEHEHLRNSDRLMDDTIS
IAMATKENMTSQRGMLKSIQSRVNTLANRFPTINNLIQRINLRKRRDSLILGTVIGVCTI
LLLLYAFH
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaataggaagcagcaactactgggaggatctgcgaaagcaggccaggcagctg
gagaatgaacttgacctgaagttggtctccttcagtaaactgtgtaccagctacagcagc
tccagggatggacatcgaggagacacgtcagacaccaccccactgttaaacaactctacc
caggacaggatgtttgacaccatgtcagtggagattgaacagctgctggccaaattgact
gcagttaatgacaagatggcggagtacaccaacgccccgggaacgacttctctcaatgct
gcactcatgcacactcttcagagacacagagacatcctacaggattacacacatgaattc
cacaaaaccaaaggcaacttcttggctatccgagaaagggaagacctgctggggtccgtc
aggaaagacatcgagacatataagagtggctccggggtcaacaacagaagaacagagctg
tttttaaaggagcacgagcacctgagaaattcggaccgactgatggatgacacaataagt
attgccatggcgaccaaggagaacatgacctcccaaaggggcatgctgaaatccatacag
agcagggtcaacacgctggccaaccgtttccccaccatcaacaatctcatccagcgaatc
aacctgcggaagagacgggactctctcatccttggtacagtgattggcgtctgcaccatt
ctcctcctcctctatgcttttcactga
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