KEGG   Lates calcarifer (barramundi perch): 108890416
Entry
108890416         CDS       T04895                                 
Name
(RefSeq) elongin-B
  KO
K03873  elongin-B
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108890416
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lcf04121]
    108890416
   03400 DNA repair and recombination proteins [BR:lcf03400]
    108890416
Ubiquitin system [BR:lcf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     108890416
   Cul5 complex
     108890416
DNA repair and recombination proteins [BR:lcf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     108890416
SSDB
Motif
Pfam: ubiquitin Rad60-SLD
Other DBs
NCBI-GeneID: 108890416
NCBI-ProteinID: XP_018542799
UniProt: A0A4W6CNH4
LinkDB
Position
LG23:complement(8883125..8886154)
AA seq 119 aa
MDVFLMIRRHKTTIFTDAKESTTVYELKRIVEGILKRPPEDQRLYKDDQLLEDSKTLGDC
GFTNQTARPQAPATVGLAFRINDEMFEQLHIEAFSSPPELPDVMKPQDSGSTANEQAVQ
NT seq 360 nt   +upstreamnt  +downstreamnt
atggacgtgttcttaatgatccggcgtcacaagactacaatcttcacagacgccaaggag
tccaccaccgtctatgagctgaagcgtattgttgaaggaattcttaaaagaccacctgag
gatcagcggctctacaaagatgaccagttgctagaggacagcaaaactctgggtgactgt
ggattcaccaaccagactgccagacctcaagccccagctacagttggcctggccttccgc
ataaatgatgagatgtttgagcagctgcacatcgaggccttctccagtcccccagaactc
cctgatgtgatgaagcctcaggactccggtagcactgccaacgaacaggcggtgcagtga

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