Lates calcarifer (barramundi perch): 108890440
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Entry
108890440 CDS
T04895
Symbol
hsc70
Name
(RefSeq) heat shock cognate 71 kDa protein
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03040
Spliceosome
lcf04010
MAPK signaling pathway
lcf04141
Protein processing in endoplasmic reticulum
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108890440 (hsc70)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108890440 (hsc70)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108890440 (hsc70)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108890440 (hsc70)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108890440 (hsc70)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108890440 (hsc70)
03009 Ribosome biogenesis [BR:
lcf03009
]
108890440 (hsc70)
03110 Chaperones and folding catalysts [BR:
lcf03110
]
108890440 (hsc70)
04131 Membrane trafficking [BR:
lcf04131
]
108890440 (hsc70)
03051 Proteasome [BR:
lcf03051
]
108890440 (hsc70)
03029 Mitochondrial biogenesis [BR:
lcf03029
]
108890440 (hsc70)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108890440 (hsc70)
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
108890440 (hsc70)
Spliceosome [BR:
lcf03041
]
Complex B
Other components
Prp19 complex
108890440 (hsc70)
Complex C
Prp19-CDC5 complex
108890440 (hsc70)
Ribosome biogenesis [BR:
lcf03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108890440 (hsc70)
Chaperones and folding catalysts [BR:
lcf03110
]
Heat shock proteins
HSP70 / DNAK
108890440 (hsc70)
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
108890440 (hsc70)
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
108890440 (hsc70)
Proteasome [BR:
lcf03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
108890440 (hsc70)
Mitochondrial biogenesis [BR:
lcf03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
108890440 (hsc70)
Exosome [BR:
lcf04147
]
Exosomal proteins
Proteins found in most exosomes
108890440 (hsc70)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Ppx-GppA
DDR
CRIC_ras_sig
Motif
Other DBs
NCBI-GeneID:
108890440
NCBI-ProteinID:
XP_018542824
UniProt:
A0AAJ7PZM6
LinkDB
All DBs
Position
LG15:complement(22848718..22853741)
Genome browser
AA seq
645 aa
AA seq
DB search
MSKGPAVGIDLGTTYSCVGIFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
MNPANTVFDAKRLIGRKFDDPVVQSDMKHWPFKVVNDSSKPKVEVEYKGEMKTFYAEEIS
SMVLTKMKEISEAYLGKPVTNAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAA
IAYGLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH
FIAEFKRKFKKEINNNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGTDFYTSITRA
RFEELNADLFRGTLEPVEKALRDAKMDKTQIHDIVLVGGSTRIPKIQKLLQDFFNGRDLN
KSINPDEAVAYGAAVQAAILAGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTI
PTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNILGKFELTGIPPAPRGVPQIEVTFDI
DANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEQFRAEDEVQRDKVAAKN
SLESLAFNMKSTVEDEKLQDKISPEDKKTIVDKCNEVIAWLDRNQMAEKEEYDHQQKELE
KVCNPIITKLYQGGMPGGMPGGMPGGFPGGAGGGSSSGPTIEEVD
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaggaccagcagtaggcattgatctgggaaccacatattcctgtgtgggcatc
ttccaacatggcaaagtggagatcatagctaatgaccaaggaaacaggaccacgcccagc
tatgtggccttcacagacacagagagactgattggagatgctgccaagaaccaggtggcc
atgaacccagccaacactgtatttgatgctaagcgcctgattggccgtaagtttgacgac
ccagtggtgcagtcagacatgaagcactggcccttcaaggttgtgaatgattcatccaaa
cccaaggtggaggtggaatacaagggtgagatgaagaccttctatgctgaggagatttcc
tcaatggtccttaccaagatgaaagagatttctgaagcttatcttggcaagcctgtcacg
aatgcagttattacagttcctgcttacttcaatgactcccagcgtcaggccaccaaagat
gctggagccattgctgggcttaatgtgctgcgcatcatcaatgagcccactgctgctgcc
attgcttatggcctggacaaaaaggttggcagcgaacgaaatgtccttatctttgacctt
ggaggtggcacatttgatgtgtccatcctgactattgaggatggcatctttgaggtcaag
tccacagcaggtgacactcacctgggtggtgaggactttgacaaccgcatggttaaccac
ttcattgctgagttcaagcgcaagttcaaaaaggaaatcaacaacaacaagcgagccgtg
cgtcgtctacgcacagcatgtgagcgtgctaagcgcaccctctccagcagtacccaggcc
agtattgagatcgattcactctatgaaggaacagatttctacacttccatcaccagggct
cgttttgaagagctgaatgcggacctgttccgtggaaccctcgagcctgtggagaaggcc
ctgagggatgccaagatggacaagacccagatccatgacattgtcctggttggtggctcc
acacgtatccccaagattcagaagctgttgcaggacttcttcaacggtcgcgatctcaat
aagagcatcaaccctgatgaggctgtggcctatggtgcagctgtgcaggctgccatcttg
gctggtgataagtctgagaatgtacaggacctgctcctgctggatgtaacccccctgtcc
ctgggaattgagaccgctggaggagtaatgactgtccttatcaaaaggaacaccaccatc
cccaccaagcaaacccagacctttaccacctattcagacaaccaacctggtgtgcttatt
caggtttatgaaggtgagagagccatgaccaaggataataatatcctgggcaagtttgag
ctgactggtattccacctgctcccagaggggtccctcagattgaggtgacctttgacatt
gatgccaatggcattctcaacgtctctgcagtggacaaaagcactggaaaggagaacaag
atcaccatcactaatgacaaagggcgactgagcaaggaggacattgagcgcatggtacag
gaggcagagcagttcagggctgaggacgaagtccagagagacaaggttgcagccaagaat
tccctcgagtctctggccttcaacatgaagagcacggtggaggacgagaagctccaagac
aagattagccctgaggacaaaaagaccattgtggacaagtgcaacgaggttattgcctgg
ctggacaggaaccagatggcagagaaggaggagtacgatcaccagcagaaggaactagag
aaagtgtgcaaccccatcatcacaaagctataccaggggggtatgccaggagggatgcca
ggaggaatgcctggtggtttccctggtggagctggaggtggctcctcctctggcccaact
attgaggaggtcgactga
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integrated database retrieval system
