Lates calcarifer (barramundi perch): 108890442
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Entry
108890442 CDS
T04895
Name
(RefSeq) triadin isoform X1
KO
K23449
triadin
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04020
Calcium signaling pathway
lcf04260
Cardiac muscle contraction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108890442
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
108890442
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Asp-B-Hydro_N
Motif
Other DBs
NCBI-GeneID:
108890442
NCBI-ProteinID:
XP_050927691
UniProt:
A0AAJ8B784
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Position
LG7_1:complement(3218032..3242763)
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AA seq
1338 aa
AA seq
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MTEAVEARSSTTTTMVIDSKSGDAGAPSVRTSKKTFMDDLHATFSSPLAWILVLALIITW
SCVFVIMFDLMDYKTISGRPPPPVRKILKDSGRRGGLSKIGSDPMKAVNDAMEESANVVS
VMLKFAASLIAPEEDEGNLYAVRKKGEFLPSRSKVIGMQAKQTPPVVEVVEEEEEEEEEE
EEAEAAGEEEEEYAEEEYEEEEYEEEEYEEYEEEEEEYEEEEEEEEEYEEEEEEEEEEGE
YEEEEEYEEEEEEYEEEEEGEYEEEEGVEEEEEGVEEEEAEEEEDVGGVEDEEEEEEGEE
EEEEEEEGADVVEEEEEEEGAEEEEEEEEEVAAEVEQDDEDEEDEKEPEAAAPETDDDDD
EDDEGELKEEAAEEEEDRDDEDDEAEDEKEDAADEDEDEDEEVSPEPVSTSEDEGSAVSP
DSDSDVPADVKDSDEDATLPDEDDEKDEEEHDEDDASDDEFTDTSDVSESAPLSSDEDEE
QDDDDDDDEGFATTDSDDVVAEDSDDLELDLPPVAASSEDDEDEDIDDDKVAEEEELPPL
PAVEDDDEDLEEDVNVAEDADDDDDLDLSDEDISVASSEHFADDEDDEDDSDLDKDVHLD
LDVEDKPDDVIEEEIDDDDDKEEEEEDVPTLESTDSGVLGDDDDDDIKTGEESVGETVFS
DDVSYDTTDDDDEDIDTSSFEFTLDQDDKDEVKETFVDAEKDEDELQDEITSESLADEEE
DDDDDDEDKEDDDDVDDVLLAATTAAAFTVQEEAVKAEADDDDDDEEEEEEISQADDEDK
TEEAETEETVSSRPAALEEEDEGEDEEPVAETQKSVDEPEDKKEEYDEDDDEEKATVDVI
KPLPEPEEEAVKSEPTACLCVDAAQTKESDTKTTEKREAPRRVSALRRRKDKERAAVKTE
PKRKALPRIAALEPKIRRIRRSPALLRAKREAKAKASKPETVTKKQEEGPESGQEVGPCR
PAPVYCPSPPGWYVHHIVTDNPYPPPTVSAPSAPVLTAHPVHPGAPPMQPLYQQQPPPPM
QPLYAQYQPYQPPPLQPVMQPQPEPAQPAEPVQPAQPEAPEQEAPVQPEVQTPAAEAQPA
AALVQEPETVEEEVKAASTKKAAKTKTKAADSDKEAEAAAKEKTKKDAAVSKDKTKATAA
KKVPVAKKEKTKTPTVAKKEPAVKKKTQTAAAAKKEPAAAQQKRKSETEASAVRSKAKAS
AAKKDRDAEPRPQPIRLRPRLEAVKRANVTSQAKEEKPAKTRSKLEAEKKSKAEKAEKKS
VKEAQDKDKQPPQTKESQTEDNTTEKKKPGQRYFQCVYVPGKNAQYPLRPFTPAMSPTMM
SPALRSMLEQRAARAAGQ
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggcagttgaagcacggtcgtcgaccaccaccaccatggtcattgacagtaag
agtggagacgctggggcaccatctgtacgaacctccaagaaaactttcatggatgacctc
cacgctactttcagctccccgctggcctggatcttagtgctggctctcatcattacatgg
tcttgtgtttttgtcatcatgtttgatctgatggactacaagaccatttcaggtcgccca
cctcctcccgtcaggaaaattttaaaggattcagggcgtagaggaggcctcagcaagatc
ggatcagaccccatgaaggcggtgaatgatgccatggaggagtcggcgaacgtggtcagt
gtaatgttaaaatttgctgccagcctgatcgctcctgaagaagatgaaggaaatctatac
gcagtgagaaaaaaaggagaatttctaccgtctcgaagtaaagttatagggatgcaagca
aagcagacgccaccagtggttgaagttgtggaggaggaagaggaggaggaagaggaggag
gaagaagcagaggctgctggggaggaggaggaagagtatgcagaagaggagtatgaggag
gaggagtatgaggaggaggagtatgaggagtatgaggaggaggaggaagagtacgaggag
gaggaggaggaggaggaagagtacgaggaggaggaggaggaggaggaggaggagggagag
tatgaggaggaggaagagtatgaggaggaggaagaagagtacgaggaggaggaggaggga
gagtatgaggaggaggaaggagtggaagaggaagaagagggagtggaggaggaggaagcc
gaagaagaggaggacgtaggaggagttgaagatgaggaggaggaggaggagggagaggaa
gaagaggaggaggaggaggagggggccgatgttgtggaggaggaggaggaggaggaagga
gcagaagaggaggaggaggaggaggaggaggtagctgctgaggtggagcaagatgatgaa
gacgaggaagatgagaaggaacctgaagcagctgcaccagagactgatgatgatgatgat
gaagatgatgaaggtgaattgaaagaggaggcagcagaagaagaggaggacagagacgat
gaagatgatgaggcagaggacgagaaggaagatgctgctgatgaagatgaagatgaggac
gaagaagtttctcctgaacctgtttccacttctgaggacgaagggtcggccgtgtctcct
gactctgactctgacgtacccgctgatgtcaaagacagcgacgaagacgcaactctccct
gacgaagatgatgaaaaagatgaagaagaacatgacgaagacgatgccagtgatgatgag
ttcactgacacctcggacgtcagcgaatcagcacctctttccagtgatgaggatgaagaa
caagacgatgacgacgacgacgacgaaggtttcgcaacaactgacagtgatgatgtcgtt
gcagaagacagcgacgacctggagctcgatcttcctcctgtcgccgcttccagtgaggat
gacgaagatgaagatattgacgacgataaagtggcagaagaggaggagcttcctcctctg
cctgctgtcgaagacgacgacgaagacctggaagaagacgtcaacgttgctgaagacgcc
gatgatgatgatgatctggacctatcagatgaggacatctctgttgcctcctctgagcac
tttgcagatgatgaagatgatgaagacgacagtgacctcgacaaagacgtccacctcgac
cttgatgttgaagacaaacctgatgatgtcattgaagaggagatcgatgatgatgatgat
aaagaggaagaggaggaggacgtccctactttggagagcacagacagcggagtcttgggt
gacgacgacgatgacgacataaaaacgggtgaagaatctgttggagaaaccgtcttcagt
gatgacgtctcctacgacacgactgatgacgacgacgaagatattgataccagctctttt
gagttcactttagatcaagacgacaaagacgaggtcaaagaaacatttgttgatgctgaa
aaagacgaagacgaacttcaagatgaaatcacatctgagtccttagctgatgaggaagaa
gatgatgatgatgatgatgaagataaggaggatgatgatgacgttgatgacgtcttgctc
gcagccaccactgcagcagcgttcactgtccaggaggaggcagtaaaggctgaggcagac
gacgacgacgacgatgaggaggaggaggaggagatcagtcaggctgatgatgaagataag
actgaggaggctgaaacagaggagactgtttccagtcggcctgctgctcttgaggaggag
gatgaaggagaagatgaagagccggtggctgaaacacagaaatctgtagatgaaccagag
gataaaaaagaggagtacgacgaagacgacgatgaagagaaggcgacagtggacgtcatc
aagcctttgcctgaacctgaggaggaagcagtgaagtctgaacccacagcttgtctctgt
gtggacgctgctcagaccaaagagtctgacaccaagaccacagagaaaagagaggctccc
aggagggtttcagctctgaggaggagaaaagataaagagcgtgcagctgtgaagacagag
ccaaaaaggaaagctcttcccagaattgcagcactagagccaaaaatcaggaggataagg
agaagccctgctcttcttagagccaagagagaggcgaaggccaaggcttccaaaccagag
acagtgactaaaaaacaagaggagggcccagaatctggacaagaagttggtccttgcaga
cctgcaccggtctactgcccatctccacctggctggtacgttcatcacatcgtcacagac
aacccgtaccctcctccaactgtgtcagctccgtctgctcctgttctgaccgcccatccc
gtccaccctggagctccaccgatgcagcctctttaccaacagcaaccacctccgccgatg
cagccgctctacgcacaatatcaaccatatcagccgccaccactgcagccggtgatgcag
cctcaaccagaaccagctcagccagctgaaccggttcagcctgcgcagccagaagcccca
gaacaagaggcccctgttcagcctgaggtccagactccagctgctgaagctcagccagct
gcagctctggtccaggaaccagagactgttgaggaagaagtgaaggctgcctccactaag
aaagctgcaaagacgaaaaccaaggctgctgattcagacaaagaggcagaggcagcggcc
aaagagaaaacaaagaaagacgctgctgtttcaaaagacaaaaccaaagcaaccgcagca
aagaaagtgccagttgcgaagaaagagaaaaccaaaactcctacagtggctaagaaagag
ccagctgtaaaaaagaaaacccaaactgccgcagctgccaagaaagagcctgcagctgca
caacagaagaggaaatcagagacagaagcatcagctgtcaggagcaaagccaaggcatct
gcagcaaagaaagacagagatgcagaaccacgtccacagccgatcagactgaggccgaga
ctagaagctgtcaagagggcgaacgtaacctctcaggccaaagaggagaaaccagccaag
acaagatcaaaattagaggcagagaagaaaagcaaagctgaaaaggctgaaaagaaatct
gtcaaagaggctcaagataaagacaaacaaccaccacaaactaaagagtctcaaactgaa
gacaatactacagaaaagaagaaaccaggccagagatacttccagtgcgtctatgtccct
ggtaaaaatgcacagtaccctttacgacctttcaccccggctatgtcccccaccatgatg
tcccctgcactcaggtcgatgttggagcagcgagcagccagggcggcggggcaataa
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