Lates calcarifer (barramundi perch): 108890508
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Entry
108890508 CDS
T04895
Symbol
scrt2
Name
(RefSeq) transcriptional repressor scratch 2
KO
K09219
scratch
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108890508 (scrt2)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 Snail
108890508 (scrt2)
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GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
zf-met
zf_UBZ
C1_4
DUF7479
zf-C2H2_15
zf-C2H2_11
Zf-C2H2_ZNF451
zf-BED
zf-C2H2_16
DUF7565
zf-C2HC_2
zf-C2H2_2
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
108890508
NCBI-ProteinID:
XP_018542898
UniProt:
A0A4W6EC90
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Position
LG6:21940748..21950597
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AA seq
319 aa
AA seq
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MPRSFLVKKIKLDDFSSSNVATSNHHHHLDDSFTFARSITDSVTSLGVRLSENGYIQDYI
TPSVYQGEKKMEHKLASPVSDPLYTQVSSGGEYCDPDLKHPDSPQSGMTASGFYSGESEA
LAEGYTMDAFFISDGRSRRKGDGESRGGGSRSSSANAGAQERGAGTPRHTCNECGKTYAT
SSNLSRHKQTHRSLDSKMARKCPTCSKVYVSMPALAMHILTHDLKHKCEVCSKAFSRPWL
LQGHMRSHTGEKPFACAHCGKAFADRSNLRAHMQTHSAFKHYRCKRCNKTFALKSYLNKH
YESACFKGSADEDDSGSEN
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgccccgctcatttttggtgaagaagatcaagcttgatgatttctcttcgtccaatgtg
gccacctccaatcatcatcaccacctggacgactcgttcacttttgcacgctccatcaca
gactcggtgaccagccttggggttcgtctcagtgagaatggctacatccaggattacatc
acgccatctgtataccagggggagaagaagatggagcacaagctggcttcgccggtgtca
gaccccctgtacacccaggtgagcagcggaggggagtactgtgaccccgacctgaagcac
cccgacagcccccagtctggcatgacggccagcggcttctacagtggtgaatcggaggcc
ctggccgagggttacaccatggatgccttcttcatctctgatgggcgctcaaggcgaaag
ggagacggtgagagtcgtggaggaggctcgagaagcagcagcgccaacgcaggggctcag
gagaggggagccggcacgcctcgccacacctgcaacgagtgcggcaagacgtacgccacc
tcctccaacctcagcagacacaagcagacgcaccgcagcctggacagcaagatggcccgc
aagtgtcccacctgttctaaagtgtacgtgtccatgccggcgttggccatgcacatcctc
acccacgacctcaagcacaagtgcgaagtgtgcagcaaggctttcagccggccgtggctc
ctccaaggtcacatgcgctcacacacgggggagaagccctttgcctgcgcccactgtggc
aaagcctttgctgaccgttcaaacctccgcgcccacatgcaaacacactctgccttcaag
cactacagatgcaagcgctgcaataagaccttcgctctcaagtcctacttgaacaagcac
tatgagtcagcttgcttcaagggctctgcagacgaagacgactctggatcagaaaactaa
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integrated database retrieval system
