Lates calcarifer (barramundi perch): 108890541
Help
Entry
108890541 CDS
T04895
Name
(RefSeq) WASP like actin nucleation promoting factor b isoform X1
KO
K23612
neural Wiskott-Aldrich syndrome protein
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
lcf04520
Adherens junction
lcf04810
Regulation of actin cytoskeleton
lcf05100
Bacterial invasion of epithelial cells
lcf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108890541
09144 Cellular community - eukaryotes
04520 Adherens junction
108890541
09142 Cell motility
04810 Regulation of actin cytoskeleton
108890541
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108890541
05100 Bacterial invasion of epithelial cells
108890541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108890541
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108890541
Membrane trafficking [BR:
lcf04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
108890541
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
WASP / WAVE
108890541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WH1
PBD
WH2
DCP1
Motif
Other DBs
NCBI-GeneID:
108890541
NCBI-ProteinID:
XP_018542934
UniProt:
A0A4W6BRH3
LinkDB
All DBs
Position
LG18:complement(828553..848070)
Genome browser
AA seq
518 aa
AA seq
DB search
MSGHPPQRRQTNVGSMLLTPQENESLFNHLGRKCITLSSAVVQVFTADRNSSWNKRCCGV
ACLVKDNPQRSYFIRVFDIREGKMMFEQELYNNFMMNFPKHYYITFPGDTCQVGLNFASE
EEAKRFHSHVSELLGKRQRKTEKRRDPPNGPTLPMATVDIKNPEINSVQRYHNNSQVNNI
VHSSFPKREKKGKGKRKRLTKADIGTPSNFQHIGHVGWDPNTGFDLNNLDPELKNLFDMC
GISEAQLKDKETSKVIYDFIEKKGGVEAVKNELRRQGPPRWSAPPPPPSRGGPPPPPPHH
SSAPPPPPPARGRGAPPPPPPSRAPVSAPPPPPPSRPGMSAPPPPPPSRGFLPPPPPPAH
ASIPVAAPPPPPPPPSSSTPSSAGAPPPPPPPPPPPGPPPPAPPLPTEANEGDGGPPGKS
ALLSQIREGTQLKKVERGERPVSSTGRDALLDQIRQGVQLKPRDENTDSTPSTPAPSAGI
VGALMEVMQKRSKAIHSSDEDDDDEDDEDFEDDDEWDD
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgagtggacatccgccgcaacggcggcaaactaatgtcggttcgatgctactgacaccg
caggaaaatgaaagccttttcaaccaccttggcaggaaatgcatcacactgtcttcagca
gtggtccaggtgttcacagcagataggaactccagctggaacaagagatgctgcggagtg
gcctgtctggtcaaagacaacccccaacgatcctacttcatcagggtctttgacatcagg
gagggaaagatgatgtttgaacaggagctgtacaacaacttcatgatgaacttccccaaa
cactactacatcacatttcctggagatacatgccaagtgggtctgaactttgccagcgag
gaggaggccaaacgtttccacagccatgtgtccgagctactggggaaaagacagaggaaa
actgagaagagacgcgaccctccaaatggtcctacgttgcccatggcgaccgtcgacatc
aaaaacccggagatcaacagtgttcagcgttaccataacaactctcaggtgaacaacatc
gtgcactcctccttccccaagagggagaagaagggaaaggggaagaggaagaggctgacc
aaggcggacatcggcacgccgagcaacttccagcacattggacacgtaggatgggatcca
aacacaggctttgacttgaataacttggacccagagctaaagaacctgtttgacatgtgc
ggcatctccgaggctcagctgaaggacaaggagacctctaaggtcatctatgacttcatt
gagaaaaaaggaggcgtagaggctgtcaaaaatgagctgcggagacaaggtccgcccagg
tggagcgctcctccaccgcctccatccagaggtggccctcctcccccgcccccgcaccac
agctcggcccctccacctcctcccccggcccgggggcgaggtgccccaccgcctccaccc
ccctccagagctccggtctctgcgcccccgcctccccctccatcccggccgggcatgtcc
gctccgccgcctccccctccgagccgaggcttcctcccacctccccctccgccagctcac
gcctcgattcccgtggcggcgcctcccccgccgccgcctcccccctcgtcctcgacccca
tccagcgccggggcgccgcctccacctcctcctcctcccccgcctccaggccctccaccc
cctgctcctccgctgcccacggaggctaacgaaggggacggcggcccccccgggaagtcg
gcgctgctgagtcagatcagagaaggcacccagctgaagaaggtggagcgtggggagagg
ccggtgtccagcaccggcagagacgcacttctggaccaaatccgacaaggagtccaactt
aaaccgagggatgagaataccgattcaactccttccaccccggccccctcggcaggcatc
gtaggggccctgatggaggtgatgcagaaaaggagcaaggctattcactcctcagatgag
gatgatgacgatgaagatgatgaggactttgaggatgatgatgaatgggacgactag
DBGET
integrated database retrieval system
