Lates calcarifer (barramundi perch): 108890576
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Entry
108890576 CDS
T04895
Symbol
cxxc1a
Name
(RefSeq) CXXC-type zinc finger protein 1 isoform X1
KO
K14960
COMPASS component SPP1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108890576 (cxxc1a)
03036 Chromosome and associated proteins [BR:
lcf03036
]
108890576 (cxxc1a)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
108890576 (cxxc1a)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
108890576 (cxxc1a)
COMPASS/SET1 complex (yeast)
108890576 (cxxc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
108890576
NCBI-ProteinID:
XP_018543000
UniProt:
A0AAJ7VA24
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Position
LG6:27657547..27665252
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AA seq
618 aa
AA seq
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MSEEAVGAERGPEEEEEEGGGEEGEEECEEGEGGGGGEVAMEIPNAPVYCICRKPDINCF
MIGCDSCTEWFHGDCVGVSEKAAKAIRVWYCPSCRDRDPSLEIKYRPKKTKEKEEREVEL
ERDDKPDRDRSSTPQPKMDRRRGSQIKRSARMCGECDACLRTEDCAQCDFCKDMKKFGGP
NKIRQKCRLRQCEVRARKMLRVKDEEMSRSGGRGRGLPRKGAGHQTEEEDEEEEEEGFSE
SELELYEQYKAAGYRDLVWHSEEEDAQSDSLRKKAVKVKHVKRREKKTEKKKSVSAPKEE
VKPRRHKVKQRHRERMRHSERAGEGGVKEVGGALRQCLGPGCVEPARTNSKYCSEDCGMK
LAANRIYEILPQRIQQWQQSPCVAEEMGRRQLERIRREQQAARLRLTLMEKRFHELEGII
ANAKLQQVQHHEEVTEGDGDDTDLQIFCVSCSHPINPKVALRHMERCYAKYESQTSFGSM
YPTRIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKVPADEVCGCPLVKDVFEPTGE
FCRVSKRKCNKHYCWEKLRRAEVDLERVRVWYKLDELFEQERNLRTAMTNRAGLLALMLH
QTIQHDPITTDLRSAKDR
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggaggcggtgggagcagagcgaggcccagaggaggaggaggaggagggtgga
ggagaggaaggtgaagaagagtgtgaagagggagaaggaggaggaggaggagaggttgcc
atggagatccccaacgctcctgtttactgcatctgcaggaaaccagacatcaactgtttc
atgatagggtgcgacagctgtactgagtggtttcatggagactgtgttggagtttcagag
aaagcagctaaagctatcagagtgtggtactgtccatcctgcagagacagagacccatct
ctggagatcaaataccgtccaaagaagacaaaggagaaggaggagagagaggtggagctg
gagagagacgacaaacctgacagagacagaagctccaccccccagcccaagatggacagg
aggcggggctcacagatcaagcgttcggctcggatgtgtggcgagtgcgacgcctgtctg
aggacggaggactgcgctcagtgcgacttctgcaaagacatgaagaagttcggaggtccg
aacaagatcagacagaagtgtcgactcagacagtgtgaggtccgagctcggaagatgctt
cgggtcaaagacgaggagatgagtcggagcggtggcagggggcggggcttaccgaggaaa
ggggcggggcatcagacagaggaggaagacgaggaggaggaggaggaggggttcagcgag
agcgagctggagctgtacgagcagtacaaagctgccggatacagagacctggtgtggcac
agcgaggaggaggacgctcagtcggactctctgaggaaaaaggcagtgaaggtgaaacat
gtgaagagacgagagaagaagacagagaagaagaagtctgtgtctgctcctaaagaggag
gtgaagcctcggcgccacaaagtgaagcagcgtcatagggagcgcatgcggcacagcgag
cgagcgggagagggcggggtcaaagaggtgggtggggctctgaggcagtgtctgggtccc
ggctgcgtcgaaccggcgaggaccaactccaaatactgctccgaggactgcggcatgaag
ctggccgccaatcgtatctatgagatcctgcctcagaggatccagcagtggcagcagagt
ccgtgtgttgccgaggagatggggcggagacagctggagcgaatcaggagggagcagcag
gcggcgaggctccgcctcacgctgatggagaaacgttttcacgagctcgaaggaatcatc
gccaacgccaaactgcagcaggtccaacaccacgaggaggtgactgaaggtgatggtgat
gacaccgaccttcagatcttctgtgtttcctgcagtcaccccatcaacccaaaggtggcg
ctgcgacacatggagagatgttacgctaagtatgagagtcagacatcatttggttccatg
tacccaacacgtatagagggagccacccggttgttctgtgatgtgtataaccctcagagt
aagacgtactgtaagcggctgcaggttttgtgtcctgaacactccagagatccaaaggtc
ccggcagatgaggtctgtggttgtcctctggtcaaagatgtgttcgagccgaccggagag
ttctgtcgagtctctaagaggaagtgtaacaaacattactgctgggagaaactgcggcga
gccgaggtcgacctggagcgagtccgagtgtggtacaaactggacgagctgtttgagcag
gagaggaacctgaggacggccatgaccaacagagctgggttactggccctgatgctgcac
cagaccatccaacacgaccccatcaccaccgacctgcgctccgccaaggacaggtag
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