Lates calcarifer (barramundi perch): 108890584
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Entry
108890584 CDS
T04895
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 15 isoform X1
KO
K21343
ubiquitin carboxyl-terminal hydrolase 15 [EC:
3.4.19.12
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108890584
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108890584
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108890584
04121 Ubiquitin system [BR:
lcf04121
]
108890584
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108890584
Peptidases and inhibitors [BR:
lcf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108890584
Membrane trafficking [BR:
lcf04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
108890584
Ubiquitin system [BR:
lcf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108890584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
Motif
Other DBs
NCBI-GeneID:
108890584
NCBI-ProteinID:
XP_018543006
UniProt:
A0AAJ7PZY1
LinkDB
All DBs
Position
LG18:3040811..3060871
Genome browser
AA seq
1061 aa
AA seq
DB search
MAEGGAADLDTQRGEVAALLKTQLRKGDTWYLVDSHWFKQWKKYVGFDSWDKYQMGDQNV
YPGPVDNSGLLRGKTDGDVLAIKEHLIDELDYILVPTEGWNKLVSWYGLTEGQEPIARKV
VEQGMFVKHCKVEVYLTELKLCEDSNMDNVITRRFSKADTIDMIEKEMRKLFSIPDEKET
RLWNRYMSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDGTWPRGSTAPKSSGASNLSA
LPKISPSSLTNNHNSSFNSRNVKNSSYSLPSYHSYSNSYDYSDQSRQSERSGLCGLSNLG
NTCFMNSAVQCLSNIPPLTEYFLKDKYTDELNEDNPLGMKGEIARAYAELIKQLWSGKYS
YVTPRPFKTQVGRFAPQFSGYQQQDSHELLAFLLDGLHEDLNRIRKKPYIQLKDANGRPD
KVVAEEAWENHIKRNDSIIVDIFHGLFKSTLVCPDCSKVSVTFDPFCYLTLPLPMKKERT
LEVYLVRLDPLAKPTQYKLTVPKVGYISDLCTSLSSLSGVPAEKMIVTDIYNHRFHRIFA
TNENLSSIMERDDIYVFEVAVNRVEDTDHVVIPVHLREKYKQSGYNHTSTPLFGQPFLIA
VPRTLSEDKLYNMLLLRLCRFVRSSVEEDEEDCEETQPSKQHTVNGNATNGLLEEGSPSE
METDEQDDESSQDQELPSENDNSQSEDSVGGDNELENGVVGPQNSTTKGQQTAEHNRKRL
FTFQFNNMGKTDFSLIKEDTRQIRFDEGHLRLSDRSYLSLDWEPEIKKKYFDETVVEDFD
KHESMEYKPQKKAFFKLKDCIELFTTKEKLGAEDPWYCPNCKQHQQATKKLDLWSLPPVL
VVHLKRFSYSRYMRDKLDSLVDFPLRDLDMSEFLINPNAGPCRYDLIAVSNHYGGMGGGH
YTAYAKNKDDGKWYNFDDSSVSPANEDQIVSKAGYVLFYQRQDTVKGTGYFALDREEEED
EEEEEEGEEEEEENEGEERQERKTTATAAASCAQGASSAAAAGSIACGAAAQNDEEDLNE
NRCRKNDNEQEDEEEEEEDEEEEEEEEEEQAPNQDVTMKTN
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggaggagcggctgatctggatacccagagaggagaggtcgcggcactgctg
aaaacacagctaagaaagggagacacttggtatctggtggacagtcactggtttaaacag
tggaagaaatatgtgggatttgacagctgggacaaataccagatgggtgaccagaatgtc
tacccaggaccggttgataactctggtcttctcagaggtaagacagatggggacgtgttg
gccatcaaggagcacctcatcgacgagctcgactacatcctggtccccaccgagggctgg
aacaagctcgtcagttggtacgggctgacggagggccaggagccaattgcacgcaaggtg
gtggagcagggtatgtttgtgaagcactgcaaagtggaggtgtacctgacggagctgaag
ctctgcgaagacagcaacatggacaacgtgatcaccagacgctttagtaaagctgacaca
atagatatgatagagaaggagatgaggaagctgttcagcattcctgacgagaaggagacc
aggctgtggaacaggtacatgagcaacacctttgagcctctcaacaaacctgacagcacc
atccaagacgccggcctctaccaaggacaggttctcgtaatagagcagaagaatgaggat
ggcacatggccccgaggctccacggcacccaagtcatctggtgcttccaatctctctgct
ttgccaaagatctcgccttcatctctcacaaacaatcataacagcagcttcaacagcagg
aatgtgaagaattcgagctatagtttgccgtcctaccactcctacagtaacagctatgac
tactcagaccagagcaggcagagtgagcgctcgggcctctgtggactctccaacctgggc
aacacctgcttcatgaactctgctgtgcagtgtttaagcaatatccctcccctgacggag
tacttcctcaaagacaagtacacggacgagctgaacgaggacaacccgctgggcatgaag
ggggagatcgccagagcctacgccgagctcatcaagcagctgtggtcgggcaaatacagc
tatgtcaccccgaggcctttcaagacccaggtgggccgctttgccccacagttctcgggc
taccagcagcaggactcccacgagctgctggcctttctcctggacggccttcacgaggac
ttgaaccgcatcaggaagaagccgtacatccagctaaaggacgctaacggcaggcctgat
aaggtggtggcggaagaagcctgggagaaccacatcaagagaaacgactccatcatcgtg
gacatcttccacggccttttcaagtccaccctggtgtgtcctgattgctcaaaggtctct
gtgacttttgatcctttctgctacttgaccctgccccttcccatgaagaaggagcggaca
ctggaggtctatctcgtcagactggaccctctcgccaaacccacacagtacaaactgact
gtgccgaaggtgggctacatctctgacctgtgtacctccctctccagcctgtctggagtt
cctgctgagaagatgattgtaactgacatctacaaccaccgcttccaccggatcttcgcc
accaacgagaacctcagcagcatcatggagagagatgatatctacgtatttgaggtggcg
gtgaacagggtggaggacacggaccacgtagtgatccccgtgcacctgagggagaagtac
aaacagtcgggctacaaccacaccagcacgccgctgttcgggcagcccttcctcatcgcc
gtacccagaaccctcagcgaagacaagctctacaacatgctgctcctgcgcctctgccgg
tttgtgcgatcttcagtagaagaggatgaggaggattgtgaagagacgcagccatccaaa
caacacactgtcaatgggaacgccactaatggactcctggaggaggggtcaccgagcgag
atggagacagacgagcaggatgacgagtcgagccaggatcaggagctgccctccgagaac
gacaacagccaatcggaggactcggtgggcggggacaacgagctggagaacggcgtggtc
ggcccgcagaactccaccaccaaaggccagcagacggccgagcacaacagaaagagactt
tttacattccagttcaataacatgggcaaaacggacttctcgctcatcaaggaggacacc
aggcagatccgctttgacgagggacacctgcgactcagcgaccgctcttatctctccttg
gactgggaaccggagatcaagaagaagtattttgatgagaccgtcgtcgaggactttgac
aagcatgagagcatggagtacaagcctcagaagaaggctttcttcaagctgaaggactgc
atcgagctgttcaccacgaaggaaaaactgggagcggaagatccgtggtactgtccaaac
tgcaagcagcaccaacaggccactaagaagctggacctatggtctctgccgccggtgctg
gtggtccatctgaaacgcttctcttacagccgctacatgagggataaactggattccctt
gttgacttcccactcagagatctggacatgtctgagttcctgatcaaccccaacgctggg
ccgtgtcgctacgacctcattgctgtgtccaaccactacggcgggatgggaggaggccac
tataccgcttacgctaagaacaaagacgacgggaagtggtacaactttgatgacagcagc
gtgtctcctgccaacgaagatcaaatagtgtccaaagccggctatgtgctgttctaccaa
cgccaggacacggtgaaaggcaccggctacttcgccctcgaccgcgaggaggaagaggat
gaggaggaggaagaggagggcgaagaggaggaggaagagaacgagggcgaggagagacag
gagagaaaaaccaccgccactgccgccgcctcctgtgctcagggtgcctcgtctgctgct
gccgccggcagtatcgcctgcggcgccgccgctcagaacgacgaggaggacctgaacgag
aaccggtgcaggaagaacgacaacgagcaggaagacgaggaggaggaggaggaagacgaa
gaggaggaggaggaagaggaggaggagcaggcacccaatcaagacgtcaccatgaaaacc
aactga
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integrated database retrieval system
