Lates calcarifer (barramundi perch): 108890601
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Entry
108890601 CDS
T04895
Name
(RefSeq) peroxisome proliferator-activated receptor alpha a
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03320
PPAR signaling pathway
lcf04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
108890601
03320 PPAR signaling pathway
108890601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108890601
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lcf03310
]
108890601
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
108890601
Nuclear receptors [BR:
lcf03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
108890601
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
108890601
NCBI-ProteinID:
XP_018543039
UniProt:
A0AAJ7Q023
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Position
LG18:complement(2919256..2929863)
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AA seq
474 aa
AA seq
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MAGDLYSPPSPLGDSLLDSPLCGDLMEDLRDISQSIGDDTLGFDFPEYQSTGSGSENSVA
LDTLTPASSPSSGVCGATPGPEESLNLECRVCSDKASGFHYGVHACEGCKGFFRRTIRLK
LEYDKCERRCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPQVEKLKLKAEIKMVEK
EVKSPMLADHKILIRQIHEAYMKNFNMNKAKARLILTGKTSKPPFIIHDMETFQLAERTL
AVHMVNDGYPEPESGLQARDVLPGVGCGELQQREAEARLFHCCQSTSVETVTELTEFAKA
VPGFQNLDLNDQVTLLKYGVYEALFTLLASCMNKDGLLVARGGGFITREFLKSLRRPFSD
MMEPKFQFATRFNSLELDDSDLALFVAAIICCGDRPGLVDVPLVEQLQEGIVQALRLHLL
ANHPDDTFLFPRLLQKLADLRELVTEHAQLVQEIKTTEDTSLHPLLQEIYRDMY
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggatctctacagccccccgtccccactgggggactcccttctggacagtccc
ctgtgcggagacctgatggaggaccttcgcgacatctcccagtccataggagacgacacg
ctggggtttgacttcccggagtaccagagcaccgggtcggggtcggagaactctgttgca
ctggacaccctgaccccagcctccagtccgtcgtcgggggtgtgtggagccaccccgggt
cccgaggagagcctcaacctggagtgccgggtgtgctcggacaaggcttcgggcttccac
tacggggtgcatgcatgtgagggctgcaagggtttcttcagaaggaccatcaggttgaag
ctggagtacgacaagtgtgaacgcaggtgcaaaatccaaaagaagaatcgcaacaagtgc
cagtactgccgattccacaagtgcctctctgtgggcatgtcccacaatgccatccggttt
ggtcggatgccccaggtggagaagctgaagctaaaggcggagatcaagatggtggagaaa
gaagtgaaaagtcccatgttggccgaccacaagattctgatcaggcagatccacgaagct
tacatgaagaacttcaacatgaacaaagcgaaagctcggctcatactcaccggaaaaacc
agcaaaccgcctttcatcattcacgacatggagacgttccagctggcggagaggacgtta
gcggtccacatggtaaacgatggatacccagagcccgagagtggccttcaagctagggat
gtgcttccgggtgtggggtgtggggagcttcagcagagggaggctgaggctaggctcttc
cactgctgccagagcacctcggtggagacggtcacagagctgacggagttcgctaaggcc
gtgccgggtttccagaacctggatctgaacgatcaggtgactctattaaaatacggtgtt
tatgaagccctcttcaccctcctggcctcctgcatgaacaaagacggcctcctggtggcc
cgtggtggaggcttcatcactcgtgaatttctcaagagtctccggcgtccatttagcgac
atgatggagcccaagttccagtttgccacacgcttcaactctctggagctggacgacagc
gacctggccctttttgtggcggccattatctgctgtggagaccgtccaggcctggtggat
gtacctctggtggagcagctgcaggaaggcatcgttcaggcgctacggctccacctgctg
gccaaccaccccgacgacaccttcctctttccccgactcctgcagaagctggctgacctc
cgggagctggtcaccgagcatgctcagttggtgcaggaaatcaaaacaacggaggacacg
tcgctgcaccctctgctgcaagagatatacagggacatgtactga
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