Lates calcarifer (barramundi perch): 108890609
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Entry
108890609 CDS
T04895
Name
(RefSeq) PR domain zinc finger protein 4 isoform X1
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108890609
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
108890609
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
Zn_ribbon_PRDM4
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
TFIIA
zf-C2H2_jaz
DUF7479
zf-C2H2_16
zf-C2HE
PAT1
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451
Motif
Other DBs
NCBI-GeneID:
108890609
NCBI-ProteinID:
XP_018543053
UniProt:
A0A4W6FLQ4
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Position
LG18:complement(2800537..2809941)
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AA seq
889 aa
AA seq
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MNDMNLSPVGMDQLSVPSVSASHLGLPTSPTHNPIPTPGMPMAIPSLGPSLGSLPSALSL
MLPMGPLSDRGVMCGLPERNYSLPPPPYPHLESSYFRHILPGILSYLADRPPPQYIHPSS
LNMDGTLSVASNNPSGLDPYSGPGGPLEQGLVPMDSRQVSGQGDLHQTGAHELDSTGLAM
ESRVSSPMSPDRMGEELATMDGVGVVAVSDTQQQLGGGRQPQPHEGLTGVDSSGGVMPLH
GPPVLELPVVMEPDHMGGRVGNGGGGGAGGLGEQLHSNGELNSGVVSVVLTSSMASQGQL
EPVPLHGHSGMGLEAVNVSPITAEVSLGPENNLVLVNSTLQLEDSTSNKENMVTAYTIWC
TLCERSYTSDCPEHGPVTFIPDAPIQSRARLSLPRPLCLRISVADEPLGVFARDVIPPRT
CFGPMVGQHCSNVDLSDWPEKDTPQVWKMYHNNVLEFYIVTTDENECNWMMFVRKARTRE
EQNLVAYPANGKLFFCTTTEIHPDQELLFFYSRDYCRMMGVPQVPEGQICQCGKECSSFS
ELKSHLSSHNSNHSHNQPPHSHSPSQQDHAQQQQQQQSQQQQQQQQQQQQQQEQQSQQPQ
HTHQEEKLTNGTSSSSSSPWPCHAHAAGQTNNDNNSSSGDRNSNDVSSRAKGQGHVREKK
FKCSMCSRAFITSTKLNVHFMGHVGMKPHKCEYCSKAFSDPSNLRMHLKIHTGQKNYRCT
VCEKSFTQKSHVASHMLIHTGAEKLKCDLCDRAFIRKHDLKQHMFSHTHERRIQCPKCNK
HFLKTNHLKKHMNSHEGRRDFVCEKCHKAFLTKYHLTRHLKICKGPKTEKGSRKEQDVDE
DDEEEEEEEEDDSRGGRGGGERLVDSANNEDCGLDVGGYNSEKSLSPPH
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacatgaacctgagtcctgtgggcatggaccagctcagtgtgccctcagtgagt
gccagtcacctggggctgcccacctcccccacacacaaccccatccctaccccaggcatg
ccaatggccatccccagcctgggtccctccctgggctccctcccttctgccctctcactg
atgctccccatgggtccgctgagtgacagaggagtgatgtgcggcctgccggagaggaac
tactccctgccacctcctccgtacccccacctggagagcagctacttccgacacatattg
ccaggtatattgtcttacctggcggaccgtccaccacctcagtacattcatcccagcagc
cttaacatggatgggaccctctctgtggccagcaacaatccctcaggtctggacccctac
agtggccctggtggcccactggagcagggactggtgcccatggactccagacaggtcagt
gggcagggggacctccaccagaccggtgctcatgaactggactctacaggattggccatg
gagtcgcgtgtcagcagccccatgtcccctgataggatgggagaggagctggccaccatg
gatggagtcggggtggtggcggtgtcggacacccagcagcagcttggcgggggaaggcaa
cctcagccacatgaaggcctcaccggggtggactcgtctggcggggtgatgcccctccac
gggccccctgtgcttgaactaccagtggtgatggagccagatcatatgggaggacgagtg
ggaaacggcgggggaggaggagctgggggacttggggagcagctccactcgaatggggag
ttgaactcaggagtcgtcagtgtggtgctcaccagctccatggccagtcagggccagctg
gagccggtgcccctgcatggacactctgggatggggctggaggcagtaaacgtgtccccc
atcactgcagaggtgtcactggggccagaaaacaacctggtgctggtgaactccaccttg
cagctcgaggattctacctccaacaaggagaacatggtcactgcctacactatttggtgc
acactgtgcgagcgctcatatacctcagactgcccagagcatggcccagtcaccttcatc
cctgacgcacccatccaaagccgggctcgcctctctctgccacgtccactgtgcctgcgc
atctcagtggctgatgaaccacttggagtttttgcacgggatgtcattcctccgaggacc
tgctttggaccaatggttgggcagcattgtagcaacgtggatctctctgactggccagaa
aaggacacacctcaagtatggaagatgtatcacaacaatgtgctggagttctacatcgtg
acgacagatgagaatgaatgcaactggatgatgtttgtccgcaaggcgaggactcgtgag
gagcagaacctggtagcgtaccctgccaatggtaaattgttcttctgtacaaccacagag
atccaccctgaccaggagctgctcttcttttacagcagagactactgcaggatgatgggt
gttcctcaggtgcctgagggccagatctgccagtgtggcaaagagtgctcgtccttctct
gagctcaagtctcatcttagcagccataacagcaaccacagccataaccaacctccgcac
agccacagtccgtcacagcaggaccacgctcagcaacaacagcagcagcagtcacagcaa
caacaacagcagcagcaacagcagcagcagcaacaagagcaacaatcacagcaaccgcaa
cacactcaccaggaggagaagctgaccaacgggacctcgagctcctcctcctcgccgtgg
ccctgccacgcccacgctgcaggacaaacaaacaatgacaacaacagcagcagcggtgat
agaaactctaatgacgtttcctcaagagcgaaaggtcagggtcatgtgcgagagaagaaa
ttcaagtgcagcatgtgttcccgggctttcattacatccactaagctcaacgtgcacttc
atggggcacgtggggatgaaacctcacaagtgtgaatactgcagcaaggccttcagtgat
cccagcaacctcaggatgcacctaaagatccacacaggtcagaagaactacagatgcacg
gtttgtgagaagtcattcacgcagaaatcccacgtggcgtcgcacatgcttatccacacc
ggtgcagagaagctcaagtgtgacctctgtgaccgggcgttcatcaggaaacatgacctg
aaacagcacatgttctctcacactcacgagcgccggattcagtgcccaaagtgcaacaaa
cacttcctcaagaccaaccacctgaagaagcacatgaactctcacgagggccgcagagac
tttgtctgcgagaaatgccacaaagctttcctcaccaaataccacctcacccggcacctc
aagatatgtaaagggcccaagacggaaaaagggtcccgcaaggagcaggatgtagatgag
gacgatgaggaagaggaggaggaagaggaggatgacagcaggggagggagaggaggagga
gagagactggttgactcagctaataatgaagactgtggtttagatgttggaggatataac
tctgaaaagtccctgtcacccccccattga
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