Lates calcarifer (barramundi perch): 108890615
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Entry
108890615 CDS
T04895
Symbol
kars1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108890615 (kars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lcf01007
]
108890615 (kars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcf03016
]
108890615 (kars1)
Enzymes [BR:
lcf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
108890615 (kars1)
Amino acid related enzymes [BR:
lcf01007
]
Aminoacyl-tRNA synthetase
Class II (A)
108890615 (kars1)
Transfer RNA biogenesis [BR:
lcf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108890615 (kars1)
Prokaryotic type
Other AARSs
108890615 (kars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF374
Motif
Other DBs
NCBI-GeneID:
108890615
NCBI-ProteinID:
XP_018543072
UniProt:
A0A4W6G1F1
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All DBs
Position
LG2:complement(1010438..1016837)
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AA seq
610 aa
AA seq
DB search
MLCLIRAARPQLCRAFGVGGQWLKCVTPHTAAGPAQFYGKQWRGDKSELKRRMKAEKKAA
EKEAKVKEQVEQKKESNDQGAQNACLLDEETLDPNQYFKIRSQAIQDLKGTAEDPYPHKY
HVDLSLTEFIEKYNHLQPGDQLTDVVLRVSGRVHAKRASGAKLLFYDLRGEGVKLQVMAN
SRNYKSEEDFVAINNKLRRGDIIGVRGNPGKTKKGELSIIPIEMTLLSPCLHMLPHLHFG
LKDKETRFRQRYLDLILNDYVRQKFITRAKIITYLRSFLDQLGFLEIETPMMNLIPGGAV
ARPFVTYHNELDMNLYMRIAPELYHKMLVVGGIDRVYEVGRQFRNEGIDLTHNPEFTTCE
FYMAYADYHDLMEITEKLLSGMVKHITGGYKVTYHPDGPEGQAYEIDFTPPFRRVSMTHD
LEKIMGVKFPPTDSYDTDETRKFFDDLCAQRGVECPPPRTTARLLDKLVGDFLEVTCINP
TFICDHPQIMSPLAKWHRSQKGLTERFELFVMKKEICNAYTELNDPIRQRELFEQQAKAK
AEGDDEAMFIDETFCTALEYGLPPTAGWGMGIDRLTMFLTNSNNIKEVLLFPAMKPDDNK
TSAPTEGTSV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgtctgatcagagcagccagaccgcagctgtgccgagcctttggggtcgggggg
cagtggttaaaatgtgtaaccccacatacagctgcaggcccagctcagttttacgggaag
cagtggagaggtgacaaaagtgagctgaagagacgaatgaaagctgagaagaaggcggct
gagaaagaggccaaggtcaaagaacaggtggagcagaagaaggaatccaatgaccaggga
gcgcagaatgcctgtctgctggatgaggagacgcttgaccccaatcaatactttaagatc
cggtcccaggcgatccaggacctgaagggcacagcggaggacccgtacccacacaagtac
cacgtagacttgtccctcacagagttcattgagaaatacaatcatctacagcctggagac
cagctgacagatgttgttctccgtgtgtctggccgcgtccatgccaagagggcctctggt
gccaagctgcttttctatgacctgcgaggtgaaggcgtcaagttgcaagttatggcaaac
tcgaggaactacaagtctgaggaagactttgtggccatcaacaacaaactacgccgcggt
gacatcatcggtgtccgtggtaacccagggaaaactaaaaaaggggagctgagcatcatt
cccattgagatgaccctactgtcaccctgtttgcacatgctgccccacctccactttggc
ctcaaagacaaggaaacacgattccgtcagcgctacttggatctgatcctcaatgactac
gtgaggcagaagtttataacccgcgccaaaatcatcacatacctgcgcagcttcctggac
cagctgggatttttggagatcgagacaccgatgatgaaccttattcctggtggagcagtg
gcccggccgtttgttacttaccataatgagctggatatgaacctgtatatgaggattgct
cctgagctctaccacaagatgcttgtggttggtggaatagacagagtgtatgaggttggt
cgtcagttcaggaatgaaggcatcgatctcactcacaatccagagttcaccacctgtgaa
ttctacatggcatatgcagattaccacgacctgatggaaatcacagagaaacttctctca
ggaatggtgaaacacatcactggaggatacaaggtgacttatcaccctgatggtccggag
ggacaggcctatgagatcgacttcactccaccgttcagaagagtgagcatgacacacgac
ctggagaagattatgggagtcaaattccctcctactgacagctacgacactgacgagaca
cgtaaattctttgacgacctgtgcgcacagagaggagttgaatgtcctccacccagaacc
actgctcgcctcctggacaagttggttggagatttccttgaggtcacctgtatcaacccc
accttcatctgtgatcaccctcagatcatgagtcctttagcgaaatggcacagatcacag
aaaggcctgacagagcgtttcgagctctttgtgatgaagaaggaaatctgcaatgcttac
actgagttgaatgatccaatcagacagagggagctttttgagcagcaagccaaggccaaa
gctgagggggatgatgaagccatgttcatcgatgagaccttctgcacggcgctggagtac
ggtctgccaccgaccgctggctggggaatgggcatcgatcgtctcacaatgttcctcacc
aactccaacaacatcaaggaggtgttgctgtttccagccatgaagcctgacgacaacaag
acatcagcgcccacagagggcacctccgtctga
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