Lates calcarifer (barramundi perch): 108890728
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Entry
108890728 CDS
T04895
Name
(RefSeq) amyloid beta precursor like protein 1 isoform X1
KO
K05639
amyloid-like protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
108890728
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Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_amyloid
APP_Cu_bd
NVEALA
OppC_N
Motif
Other DBs
NCBI-GeneID:
108890728
NCBI-ProteinID:
XP_018543236
UniProt:
A0A4W6CXX2
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Position
LG15:22723250..22754817
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AA seq
711 aa
AA seq
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MGHTALPILLAVMSYCVWENVEALAMAEVNGPGPQVVEPQIAMFCGRQLMHMNLQTGQWE
PDPQGRQGCFKEPSEILSYCQEMYPALTISHIEESKRPAPIHAWCKKGWGHCQTHSFIVL
PYRCLEGEYVSEALLVPDRCRFLHQEQMDACESYVYWRNIAKEECTADNLELHSYGMLLP
CGDHFRGVEYVCCPGRGSSSGKGEAEERDISAGPQTFTSQTSGKPNSVTKVTAPTPSPSP
DTDLDEAGMVDEDDEVVEEEEEEEEEEEVDEEEAEEEEEEEAIAVKDPEEYEYPIDSGPY
QTSDYLDSFYEKSHKPTTSSPLKGDMTTPRPTDGVDVYFEKPVDDTEHANFLRAKTDLEE
RRMKRINEIMKEWAEADNQSKNLPKTERQALNEHFQSVLQTLEEQVAGERQRLVETHLAR
VEAILNNNRRLALENYLTAVQSDPPQPERVLQALKRYMAAEQKDRRHTLRHYQHIVAVDP
QKAEQMKFQVYTHLHVIEERMNQSLALLYKDPTLAEELHNDIQELVKAERGDISELMTTS
FSETRTTEELLPAESEEEKDDEEEEERAFQNRPYPPRIEPQSNKKVSAVDEYDYTTSERP
PTYEYEEKINTSAELKQVVNKPPEIARDELQPDALETFNRGAMVGLLVVAVAIAMVMVIS
LLLVRRKPYGTISHGIVEQVDPMLTPEERQLNKMQNHGYENPTYKFFEQMN
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgggacataccgcattacctatattgctggctgtgatgtcctactgcgtgtgggaaaac
gtcgaggctctggccatggccgaggtgaacgggccaggcccccaggtggtagagccacag
attgccatgttctgcggccgtcagctcatgcacatgaacctacagaccgggcagtgggag
ccggatcctcagggccgacaggggtgcttcaaagagcccagcgaaatcctgtcctactgt
caggagatgtacccagcgcttacgatctcccatatagaggagtcgaaaagacctgccccc
atccacgcctggtgtaagaaaggttggggccactgccagacacattccttcatagtcctg
ccctaccgctgtctagaaggcgagtacgtaagcgaggccctgctggtgcctgaccgatgc
cgattccttcaccaggagcagatggacgcctgcgagagttatgtctactggcgcaacatt
gccaaggaggagtgcactgcagacaatctggagctccacagctacgggatgctgctgccc
tgtggagaccatttccgcggggtggagtacgtgtgctgcccaggccgagggagttccagt
ggtaaaggggaggcagaggagagagacatctctgctggccctcagacattcacatcccag
accagtggaaaacctaattctgttaccaaagtaacagcccccacaccaagcccctcaccc
gacacagatttggatgaggccggcatggtggacgaggatgatgaagtggtggaagaagag
gaggaggaagaggaggaggaggaagtggatgaagaggaagcagaagaggaagaggaagag
gaggcaatagctgtgaaagatccagaggagtatgaataccctattgactcaggtccctac
cagacatcagactatctggactctttctacgagaaaagccacaaacccaccacatcatca
cctctgaagggagacatgactacgcctcggcccacagatggtgtcgatgtttattttgag
aagccggtggatgacactgagcatgccaacttcctgcgtgccaaaacagacctggaggaa
cgcagaatgaagcgcatcaatgagatcatgaaggaatgggcagaggctgacaaccagtca
aagaatctaccaaagacagagcgacaggccctgaatgagcacttccagtctgtgctgcag
acactggaggagcaggtcgctggagagaggcagaggctggtggagactcacctcgccaga
gttgaggccattctcaacaacaaccgccgcctggctttggagaactacttaaccgctgta
cagtctgacccccctcagccagagcgcgtgctgcaggctctgaagcgatacatggccgcg
gagcagaaggaccgcagacacacactcaggcactaccagcatattgtggctgttgacccc
cagaaggctgagcagatgaaattccaggtgtacacacatctccatgtgattgaggagagg
atgaaccagagtcttgcactgctgtacaaggatcctactctggctgaggagctgcacaat
gatatccaggagctggtcaaggcagaacgaggagacatcagtgagctcatgaccacctcc
ttctctgagacccgcactaccgaggagctcctgccggccgagagtgaggaagaaaaggac
gatgaggaggaagaggagagagccttccagaacaggccttatcctccccgcattgaacca
cagtctaataagaaagtgtctgcagttgatgaatatgattataccacatctgagagaccc
ccgacttatgaatatgaagaaaagatcaacacctctgcagagctcaagcaggtagtcaac
aagcctcctgagattgcgagagatgaactgcaacctgatgccttggagacgtttaaccgt
ggcgccatggtggggttgctggtggtggctgtggcgattgccatggtgatggtaatcagc
ttgctgctggtgcgcaggaagccatatggcactatcagtcatggcattgtagagcaggtc
gaccccatgctgacgccagaagaacgacagctcaacaaaatgcaaaaccacggctacgaa
aaccctacctacaaattctttgaacagatgaactga
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