Lates calcarifer (barramundi perch): 108890733
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Entry
108890733 CDS
T04895
Name
(RefSeq) ras-related protein Rab-39B
KO
K07925
Ras-related protein Rab-39B
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108890733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108890733
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
lcf04031
]
108890733
Membrane trafficking [BR:
lcf04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
108890733
GTP-binding proteins [BR:
lcf04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
108890733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
AAA_22
VGCC_beta4Aa_N
TniB
Motif
Other DBs
NCBI-GeneID:
108890733
NCBI-ProteinID:
XP_018543240
UniProt:
A0A4W6CG38
LinkDB
All DBs
Position
LG14:complement(11520585..11538608)
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AA seq
213 aa
AA seq
DB search
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHDWLEEARSHVQPHSIVFLL
VGHKCDLEAQRQVTRQEAEKLAGAYGMRYIETSARDAINVEHAFTELTRDIFALVRSGDI
TIQEGWEGVKSGFVPNVVHSSEEVTKSDRRCLC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgatatggctctatcagttccggctgatcgtcatcggggactccacggtgggc
aagtcgtgtctgatccggcggttcacggagggccgcttcgcccaggtgtcggaccccacc
gtcggcgtggatttcttctcccggctggtggagatcgagcccgggaagcggatcaagctg
cagatctgggacaccgcgggtcaggagcgcttcaggtccatcaccagggcttactaccgt
aactctgtgggcgggctcctcctgtttgacatcaccaatcgtcgctccttccagaacgtc
cacgattggctggaggaggctcgaagccacgtccaaccccacagcattgtcttcctattg
gtcggccacaagtgtgacctggaggcgcagcgccaggtgacccgccaggaggcagaaaag
ctggcaggagcgtatgggatgcgctacatcgagacgtcggcccgtgatgccatcaatgtg
gagcacgccttcactgagctgaccagggatatctttgccttggtgcggtccggcgacatc
acaatccaggagggctgggaaggcgtgaagagcgggttcgtccccaatgtggttcactcc
tccgaagaggtgaccaagagtgaccgccgctgtctctgctga
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integrated database retrieval system
