KEGG   Lates calcarifer (barramundi perch): 108890786
Entry
108890786         CDS       T04895                                 
Name
(RefSeq) target of rapamycin complex subunit lst8
  KO
K08266  target of rapamycin complex subunit LST8
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04136  Autophagy - other
lcf04140  Autophagy - animal
lcf04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    108890786
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    108890786
   04136 Autophagy - other
    108890786
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108890786
Membrane trafficking [BR:lcf04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    108890786
   mTORC2 complex
    108890786
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_TEP1_C ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_Vps41 Tricorn_2nd Beta-prop_VPS8 Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_IFT122_2nd Hira TAF1C_beta-prop Beta-prop_WDR75_2nd DUF5854 Beta-prop_NUP159_NUP214 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 108890786
NCBI-ProteinID: XP_018543318
UniProt: A0A4W6G9V9
LinkDB
Position
LG23:complement(4142518..4146568)
AA seq 326 aa
MNVNQGTVGSDPVILATAGYDHTVRFWQAHSGICTRTVQHQDSQVNSLEVTPDRSMIAAA
GYQHIRMYDLNSNNPNPVINYDGVSKNITSVGFHEDGRWMYTGGEDCMARIWDLRSRNLQ
CQRIFQVNAPINCVCLHPNQAELIVGDQSGVIHIWDLKTDHNEQLIPEPEVSINSVHIDP
DASYMAAVNSSGNCYVWNLAGGIGDEVTQLIPKTKIPAHKRYSLRCKFSPDSTLLATCSA
DQTCKIWRTSNFSLMTELSIKSNNPGETSRGWMWDCAFSGDSQYIVTASSDNLARLWCVE
TGEIKREYSGHQKAVVCLAFNDSVLG
NT seq 981 nt   +upstreamnt  +downstreamnt
atgaatgtgaaccaggggacggtgggcagcgacccggtcattctggccacggctggatac
gaccatactgtccgcttctggcaggcccacagcgggatctgcaccaggacagtccagcac
caggactctcaagttaattctcttgaggtcacacctgacaggagcatgattgcagctgca
ggttatcagcacatccgcatgtacgacctaaactccaacaaccccaacccggttatcaac
tacgatggagttagcaagaacatcacgtctgtgggctttcacgaagatgggcgttggatg
tacacgggaggagaggactgcatggctcgcatctgggacctgagatcaagaaatctgcag
tgtcagaggattttccaagttaatgctccaatcaactgtgtgtgcctgcatcctaaccag
gcagagctgattgttggagaccagagtggagtgattcatatctgggatctcaagaccgac
cacaatgaacagctgattcccgagccagaggtctcaatcaactcagttcacattgaccca
gatgccagttatatggcagcggtcaacagctcgggaaactgttatgtgtggaaccttgct
ggaggcatcggagatgaagtgactcagctcattcccaaaactaagatccctgcacacaaa
cgctactctctccgctgcaagttcagccctgattcaacactattagccacatgctcagca
gatcagacctgtaagatctggagaacgtccaacttctcacttatgactgaactgagcatc
aagagcaacaatcctggagagacgtcaagaggctggatgtgggactgtgctttctctgga
gactcccagtacattgtaacagcgtcgtccgacaacctggctcgcctgtggtgcgtggaa
accggggagatcaagagggaatacagcggccaccagaaggccgtggtgtgtctggccttc
aacgacagtgtactgggctga

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