Lates calcarifer (barramundi perch): 108890802
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Entry
108890802 CDS
T04895
Name
(RefSeq) homeobox expressed in ES cells 1
KO
K09354
homeobox protein expressed in ES cells 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108890802
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108890802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108890802
NCBI-ProteinID:
XP_018543332
UniProt:
A0AAJ7Q0F0
A0A4W6BIW1
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Position
LG12:3477643..3482495
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AA seq
216 aa
AA seq
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MSQQCSVLVSQIPLLNSVTPFLLNYAITATRAESRPPFSIDRILGLELERPGNCLKLHRP
WAEIGAEKENRGNSLCSKQQHHHHPQQINSHRPTSSWYVGRRPRTAFTNSQVNVLETVFQ
VNCYPGIQLREQLAGRLDLDEDRIQIWFQNRRAKLRRSLRETRLKLVQTAVSDLRVRHQV
IGQLKANWNVRDDPELSQRLTSRLQLQVEEEEEEEE
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcagtgcagtgtcttagtctcccagattcccctgctgaattctgtcacacct
tttctgctaaactatgcaataactgcaaccagagcagagagcaggccaccattttccatc
gatcggattctgggtttggagctggaaagacctggaaactgcctgaaactccaccgaccg
tgggcagagatcggagcagagaaggagaacagaggaaacagtctctgctccaaacaacag
caccaccatcatcctcagcagatcaactctcacaggccaacatcaagctggtatgttgga
cgcagaccacgcactgccttcaccaacagccaggtgaatgtcctggagacggtgtttcag
gtgaactgttatccaggtatccagctgagggaacagctggcagggaggctcgacctggac
gaggacagaatccagatctggtttcagaaccggcgagccaagctgaggcgttccctcaga
gaaacccgcctgaagctggtccagacggccgtgtctgacctcagggtcagacaccaggtc
ataggtcaactgaaggccaattggaacgtacgagatgacccggagctcagccagcggctc
acctctcgtctccagctgcaggtggaggaggaggaggaggaggaggagtga
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