Lates calcarifer (barramundi perch): 108890817
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Entry
108890817 CDS
T04895
Name
(RefSeq) CAP-Gly domain-containing linker protein 1
KO
K23284
C1q-related factor
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108890817
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Phagocytosis
Opsonins
108890817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1q
BAR_4
BRE1B
CCDC39
ATG16
Filament
FlaC_arch
Nuf2_DHR10-like
Metal_resist
CALCOCO1
IFT57
Phage_GPO
ATG14
Rod_CreS
TBCA_PH
TPR_MLP1_2
Uso1_p115_C
Motif
Other DBs
NCBI-GeneID:
108890817
NCBI-ProteinID:
XP_018543348
UniProt:
A0AAJ7Q0F4
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Position
LG14:complement(10782986..10785848)
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AA seq
430 aa
AA seq
DB search
MVTKVFFFIALFGVASSTLPRTRTCDPVQDEPKKPPSHCSNYINIEYLDEQMERIEYELT
KRIHAVEKKTRNIDELKGLGTKLQELESHIESEFHNTKKQLEESQDDIAGLKREVQKLVN
HREIVGGNLTKIEARLDTTERQLREKKAKLENLETETETAFSDTQKLLNLYKSELSNLNT
TAQELEVKVEARLDSSRAELEAKLKKIQTDSEAFSTKLKEQKDEVEKFKGEADKKFMDVN
EQLQTQKTSLTKQKADAETLRDDVAGITNRLTSAEEKADEQKTLNSEVDKLKAAVNTKVA
FSATIIESKDVFTGPKTATTSSTLIFNKVFTNVGNAYNSKTGVFTAPVKGVYHFSFMTFG
YNSYTSGGILVKNGHYQVSTWEFTGPDTSDTTSNTVILELNVRDCINIILWEGGKIHTGV
FSGFLIYPTL
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggtcaccaaggtgtttttcttcattgctctatttggagttgcatcctccacacttcca
agaacacggacgtgtgacccagtgcaagacgagcctaagaaaccaccatctcattgctca
aattacataaacattgaataccttgatgagcagatggaaagaatcgagtatgaactgaca
aagaggattcatgctgtggaaaaaaagacaagaaacatcgatgagctcaaaggattaggt
acaaagctacaggagttagagtcacatattgagagtgaattccacaacacaaagaaacag
ctggaagaaagccaagatgacattgctggcctgaagagagaagttcaaaaactggtcaat
cacagggagatagtgggaggaaacctcactaagatcgaagcgaggcttgacacaactgag
aggcagctgagggaaaaaaaagcaaagctcgaaaatctggagacagaaactgagactgca
ttcagtgacacacagaaactgttgaatctgtacaagagtgaactgtccaacctcaacaca
acagcccaagagcttgaagtcaaagtcgaagcccggcttgattcctcaagggctgaactt
gaagctaaactgaagaaaatacaaacagacagtgaagctttcagcacaaaactgaaagaa
caaaaagatgaagttgagaaatttaagggagaagctgacaagaagttcatggatgttaat
gaacagctacaaacacaaaaaacgagtctgaccaagcagaaggctgatgctgaaactcta
agagatgatgttgcaggaattacaaaccgactgacgtcagctgaagaaaaagctgatgaa
caaaagacactcaactcagaggtggataaacttaaagcagcagtcaatacaaaggttgca
ttttctgcaactataatcgaatctaaagatgtgttcaccggacccaaaactgccaccacc
agtagtactctgatcttcaacaaagtcttcacaaatgttggcaatgcttacaacagtaaa
acaggtgtcttcactgctccagtgaaaggggtttaccacttctccttcatgacttttggc
tacaacagctacacttcagggggcatcttggtgaaaaacgggcattatcaagtgagcacc
tgggaatttacaggaccagataccagcgacaccaccagcaacacagtaattcttgaactg
aatgtcagagactgcatcaacatcatcttgtgggagggtgggaaaatacatacaggtgtc
tttagtgggttcctcatctacccaacattgtag
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