Lates calcarifer (barramundi perch): 108890821
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Entry
108890821 CDS
T04895
Name
(RefSeq) obscurin-like
KO
K06727
Fc receptor-like protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lcf04090
]
108890821
CD molecules [BR:
lcf04090
]
Proteins
108890821
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
V-set
I-set
Ig_5
Ig_4
Motif
Other DBs
NCBI-GeneID:
108890821
NCBI-ProteinID:
XP_050931706
UniProt:
A0AAJ8DU84
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All DBs
Position
LG14:complement(10548393..10570366)
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AA seq
1347 aa
AA seq
DB search
MGHTLLCVLSLFSLNTLLYGKAQGPKPTLTASSTVIPEGGSIILTCFAENSVGFRYELYR
RSSNTNEYQPIKVDESGLVFRISQGGIYSCRGGRPGTDSVTRYSEPVTIQETVSNRITVT
LQPNWSQIFSGEMIIVTCEIQGGGDTGWTYEWETTSSNNPPSHEYRINRATVSDSGDYRC
RGKSDYSITEWSDKVRLTVSPNKPRPTLTTDRTIIPAGGRVTLTCSVDGSADWKYSWFRH
ISHLSPADPVITVSEEGLYHCRGRREDSSFFTEDSNTVRIQRTVSNSITVTLQPNWPLIY
RGETITVRCEIQGGGDTEWMYEWTLAKLNTPPSHNEYRINRATESDSGDYRCKARSEYLL
TEWSDKVRLTVSPNKPSSTLRADTSIIPAGGSVTLTCSVIRSAGWTVFKWYRRSSDSSEA
QVINGIRSDHIIRISEGGIYTCRGGRGKPEFFTEESKKVTIQKTGEFSHLFCNKTTHTLS
TCLSVYQIITGYFLTVSKEVTVTLQPNWPLIYIDETITVSCEIQGGGDTEWTYEWRPAKL
NTPPSHEYRINRATVSDSGDYRCRGRKDYSLTQWSNVITLTVSSDKPQASLRADRTVRPA
GGSVTLTCSVNPSPGWKYFLYRDNKLSEPLTTHDAAFQTTGRTSVSQEGLYSCRGGRGDP
VYYTEYSHSVSIDITVSNRAVVILQPNVSEIYRGETITVRCEIQGGGDTEWEYKWKTTTS
FKPSNQHEHRISSASSSHSGDYRCKGRVKSSQHRTTEWSSSVRLTVYDNKPRPVLTVSPS
WLSPGASVTLNCEVEHPSAGWRFYWYKTVPDLSHNYYSYKLLPGNSRGTEQDSYIVHGQT
HTAGYVCRAGRGDPVFYTDNSEPKFVWSGDLHPAASLTVNPDRVQHFTSDSVSLSCEGNS
TEWRVKRFNEHGYQSHCSYWGRMTGSTCNIHLHWHNDAVYWCESGSGEFSNAVNITVQNK
PRPVLTVSPSWLSPGASVTLNCEVEHPSAGWRFYWYKTVPDLSHNSYSYKLLPGNSRGTE
QDSYIVHGQTHTAGYVCRAGRGDPVFYTENSEPKFVWSGDLHPAASLTVNPDRVQHFTSD
SVSLSCEGNSAEWRVKRFPEHGYQSDCSYWRTMTGSTCNVGLYWYDTAVYWCESGSGEFS
NAVNITVQNDYHYGIILVSPVHPVTEGESVSLGCRFRTEEKLSSVFFYHNDKLIQNDTRQ
ELNISAVSKSDEGFYKCQCSERKSAQSWMSVKVAVMEPKSSSSPVLLIVLLLCGIVLIIL
LLLCCCRKSTDPCWNRLTQSQRENKATDKTVSQDDNQQQTYSSLLQGDVHVYESIRDSEN
TGEGDYRVYETIRGSENTGEGIYEEGP
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atggggcacactttgctctgtgtgctctcattattctcactgaatacactcctctacgga
aaagctcaaggacccaaacccactctaacagcatccagcacagttataccagaagggggc
agcatcatactgacctgctttgcagagaactctgttggtttcagatatgagttgtacaga
cgttcctcaaacaccaatgaatatcagcccattaaagttgatgaatcaggactagttttc
aggatttcacagggaggcatttacagctgcaggggagggagaccagggacagattctgtc
acacgttacagtgaaccagtcaccattcaggaaactgtttcaaacaggatcactgtgact
ctacaacccaactggtctcagatattcagtggtgagatgatcattgtcacatgtgagatc
cagggaggtggagacactgggtggacgtatgaatgggaaacaaccagctcaaacaatcct
ccatcacatgaatacaggatcaacagagctactgtgtctgacagtggagactacaggtgc
aggggtaaaagtgactattccataacagagtggagtgataaagtgagactgacagtatca
cccaataaacccagacccacattgacaacagacaggacaattataccagcagggggcaga
gtgacactgacctgctctgtggacggctctgctgactggaaatactcctggttcagacat
atttcacacctttctccagctgatccagtgatcacagtctcagaggaaggtctctaccac
tgcagaggtaggagagaggattcatcgtttttcacagaggacagcaatacagtccgcatt
cagagaactgtttcaaacagcatcactgtgactctacaacccaactggcctctgatatac
agaggagagacgatcactgtcagatgtgagatccagggaggtggagacactgagtggatg
tatgaatggacactagccaagttaaacacacctccatcacacaatgaatacaggatcaac
agagctactgagtctgacagtggagactacaggtgtaaggctagaagtgaatatctccta
acagagtggagtgataaagtgagactgacagtatcacccaacaaacccagctccacactt
agagcagacacatcaatcataccagcagggggcagtgtgacactgacctgctctgtgatc
agatctgctggttggacagtttttaagtggtacagacgatcctctgactcttctgaagct
caggtcataaatggtattagatcagaccacattatcaggatttcagaaggaggcatctac
acatgcagaggagggagaggaaaaccagagttcttcacagaagaaagcaagaaagtcacc
attcagaaaactggtgagttcagtcatttgttctgcaataaaacaacacacactctttca
acatgtttatctgtttatcaaattataactgggtattttctcacagtttccaaagaggtc
actgtgactctacaacccaactggcctctgatatacatcgatgagacgatcactgtcagt
tgtgagatccagggaggtggagacactgagtggacgtatgaatggagaccagccaagtta
aacacacctccatcacatgaatacaggatcaacagagctactgtgtctgacagtggagac
tacaggtgcaggggtagaaaggattattccttaacacagtggagtaatgtcatcacattg
actgtatcatcagataaacctcaggcctcactgagagcagacaggacagtcagaccagca
gggggcagtgtgacactgacctgctctgtgaacccatcacctggttggaaatacttcctg
tacagagacaataaactctctgaacccctgaccacacatgatgctgcttttcaaacaact
ggaagaaccagtgtctcacaggaaggactctacagctgcagaggaggaagaggagaccca
gtttactacacagaatacagtcactcagttagcattgacatcactgtgtcaaacagagct
gttgtgattctgcaacccaacgtctctgagatatacagaggagagacgatcactgtcaga
tgtgagatccagggaggtggagacactgagtgggagtataaatggaaaacaaccacctca
ttcaaaccttcaaatcaacatgaacacaggatcagttctgcttcatcatcccacagtgga
gactacaggtgtaagggcagagtgaaaagttcacaacatagaacaacagagtggagttct
tcagtcagactgacagtgtatgacaataaacctcggcctgtcctcactgtgtctccatca
tggctgagtcctggagcctcagtaactctgaactgtgaggttgaacatccatctgcagga
tggaggttctactggtataagactgttcctgatctgtcacacaactactacagctataag
ctgttacctggtaacagcagagggactgaacaggattcctacatcgttcatggtcagaca
cacacagcaggatatgtgtgtagagctggaagaggagatccagtgttttacactgacaat
agtgaaccaaagtttgtctggtctggagatcttcatccagcagcgtctctcacagtgaat
cctgacagagtgcagcacttcacctctgactctgtctcactgagctgtgagggaaactct
actgagtggagagtgaagaggtttaatgaacatggctaccagtcacactgctcttactgg
gggagaatgactggatccacatgtaacatccaccttcactggcataatgatgcagtgtac
tggtgtgagtctggatcaggagaattcagcaatgcagtcaacatcactgtacagaataaa
cctcggcctgtcctcactgtgtctccatcatggctgagtcctggagcctcagtaactctg
aactgtgaggttgaacatccatctgcaggatggaggttctactggtataagactgttcct
gatctgtcacacaactcctacagctataagctgttacctggtaacagcagagggactgaa
caggattcctacatcgttcatggtcagacacacacagcaggatatgtgtgtagagctgga
agaggagatccagtgttttacactgagaatagtgaaccaaagtttgtctggtctggagat
cttcatccagcagcgtctctcacagtgaatcctgacagagtgcagcacttcacctctgac
tctgtctcactgagctgtgagggaaactctgctgagtggagagtgaagaggtttcctgaa
catggctaccagtcagactgctcttactggaggacaatgactggatccacatgtaatgtg
gggctttactggtatgatactgcagtgtactggtgtgagtctggatcaggagaattcagc
aacgcagtcaacatcactgtacagaatgattatcattatggtattatcctggtgagcccc
gtccatcctgtgactgagggagagtctgttagtcttggctgcagattcaggactgaagaa
aaactttccagtgtgtttttctatcacaatgacaaactcatccaaaatgacaccagacag
gagctgaatatctctgcagtgtcaaagtcagatgaaggtttctacaagtgtcagtgctca
gaaagaaagtcagcacagagctggatgtcagttaaagttgcagtgatggaacctaaaagc
tcttcatctcctgtgctgctgatcgttctgctgctttgtggaatagtattgattattctc
ctgctgctgtgttgctgcagaaagtcaacagatccatgttggaacaggctcacccagtct
caaagagagaataaagctacagataaaactgtcagccaggatgataatcaacagcaaaca
tattcctctcttctgcagggtgacgttcatgtctatgagtcaatcagagactctgaaaac
actggagaaggtgactatcgagtctatgaaacaatcagaggctctgaaaacactggagaa
ggtatttatgaagaaggtccataa
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