Lates calcarifer (barramundi perch): 108890957
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Entry
108890957 CDS
T04895
Name
(RefSeq) tubulin alpha-1A chain isoform X1
KO
K07374
tubulin alpha
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04145
Phagosome
lcf04210
Apoptosis
lcf04530
Tight junction
lcf04540
Gap junction
lcf04814
Motor proteins
lcf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108890957
09143 Cell growth and death
04210 Apoptosis
108890957
09144 Cellular community - eukaryotes
04530 Tight junction
108890957
04540 Gap junction
108890957
09142 Cell motility
04814 Motor proteins
108890957
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108890957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108890957
03036 Chromosome and associated proteins [BR:
lcf03036
]
108890957
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108890957
04147 Exosome [BR:
lcf04147
]
108890957
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108890957
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
108890957
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
108890957
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108890957
Exosomal proteins of other body fluids (saliva and urine)
108890957
Exosomal proteins of colorectal cancer cells
108890957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
108890957
NCBI-ProteinID:
XP_018543561
UniProt:
A0A4W6D299
LinkDB
All DBs
Position
LG6:complement(24233647..24244437)
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSIEGEGEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctccatccacgttggtcaggctggtgtccagattggcaatgcctgc
tgggagctttactgcctggaacatgggatccagccggacggacagatgcccagtgacaag
accattggaggaggagatgattccttcaacaccttcttcagtgagaccggagctggaaaa
cacgtccccagggctgtttttgtcgacctggagcccactgttatcgatgaggtgcgcact
gggacctaccgccagctcttccaccctgagcagctgatcaccggtaaggaggatgctgcc
aacaactacgcccgtggacactacaccatcggcaaagagatcattgacctggtgctggac
aggatccgcaaactggctgaccagtgcactggtcttcagggcttcctggttttccacagc
ttcggaggtggcaccggctctggtttcacctccctgctgatggagcgtctgtccgtcgac
tacggcaagaagtccaagctggagttctccatctacccagctccccaggtgtccaccgct
gtggtggagccctacaactccatcctgaccacccacaccaccctggagcactctgactgt
gccttcatggtagataacgaggccatctacgacatctgccgtaggaacctcgatatcgag
cgtcctacctacaccaacctgaacaggctaattggtcagatcgtgtcctccatcactgct
tcccttcgtttcgatggtgccctcaatgttgatctgacagagttccagaccaacttggtg
ccatatccccgtatccacttccccctggccacctatgctcctgtcatctctgctgagaag
gcgtaccatgagcagctctcagtggctgagatcacaaatgcctgcttcgagccagccaat
cagatggtgaaatgtgacccacgccacggcaagtacatggcttgctgcctcttgtaccgt
ggtgatgtggtgcccaaagatgtcaatgctgccatcgccaccatcaaaaccaagcgcacc
atccagtttgtggactggtgtcccactggtttcaaggttggcatcaactaccagcctccc
accgtggttcctggtggagacctggccaaggtccagagggctgtgtgcatgctgagcaac
accactgctattgcagaggcctgggctcggctcgaccacaagttcgatctgatgtacgct
aagcgtgcctttgttcactggtatgtgggtgagggtatggaggagggagagttctctgag
gccagagaggacatggcagctctggagaaggattacgaggaggtcggagtcgactccatt
gagggtgagggagaggaggaaggagaggaatattaa
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