Lates calcarifer (barramundi perch): 108890977
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Entry
108890977 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: inter-alpha-trypsin inhibitor heavy chain H5
KO
K24516
inter-alpha-trypsin inhibitor heavy chain H6
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108890977
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
108890977
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ITI_HC_C
VIT
VWA
VWA_3
VWA_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
108890977
NCBI-ProteinID:
XP_018543587
UniProt:
A0AAJ7Q0P8
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Position
LG6:complement(24031567..24042799)
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AA seq
1226 aa
AA seq
DB search
MDMMNLRIRCILVFFTFYVQEGLSGDYEAHLGANILLQRVKRQSRPAKPVLKVTDYHVRC
SVVSRYAVTTVQSSVWNQLPIIKEAAFEVDLPSSAFISNFSITSNGKVYVAQVKERAAAR
KIYDAAKKQGKTAGLVATKEREIEKFRVAVSVPPGARMSFSLSYEELLPRRLGRYELSLG
LRPGQAVQNLTLDVCITERTGISFIKVLPLKTTRLLSNTAKGDSDPPPSTHVERSAGCAR
VRYSPTLQQQNSVSSKGLDADFVIQYDVNLRDLIGDVQVYDGYFVHYFAPRGLPVVPKDV
IFVIDVSGSMIGTKIKQTKQAMTTILGDLREGDHFNIITFSDKVHTWKKGRTVRATRNNV
RDAKDFVKRIIAEGWTNINAALLSAAQLVNPPSSGSSNLLSSRRVPLVIFLTDGEATIGV
TAGDTILSNAKKALGSASLFGLAFGDDADFLLLKRLALDNRGVARMVYEDADAALQLKGF
YDEVASPLLSDIQLSYLDDQAFDITRSLFPNYFQGSELVVTGRVRPGVKDLKVSMSATDS
KQHVKIENDVLISHAKGDESVDSLDCSGGLEGISSFVHRLWAYFTIKELLLAKLNATDPA
TQRLLADKATNLSLKYNFVTPVTSLVVVKPDADEAAPSPTTAKPTTAATTTTTATTTATS
KISAAGAAKKPSTPSNPRPNKTKPSPPQPPPNIPQTKKHSSPTSTAKTGVSPSKKTTTTS
SPSSIKTAPAPLSGKKPTPSQNDSKTASPPPAGKIAISLLNALKTAPPPAPGKVSTLPPN
AMKTTSPSVLTFTTTPPLSSVRTDPSPLPGRQLTPQPSTARTVLPAVRVTVPSTEAENNS
TSAPDVPQPGIATALPELSSPLTSPTPAPSPAVEDNNTNTGADTDFSIATLVSATFAPMP
GVTDGPRLWEAAGLLDVSTSIQIQRKDIDLVKDYEATYDYDYDLNYDAWDDTADTGSFES
PSRLSTVRVFSSSVDGDPHFVVQLPKLHQSLCFTVDGRANDVLRLLEDPDRGTIVDGHLI
AAPSKHGAEDRSRTYFDHLTISTATGGSGDIMITVSLDTVVVEGEGRDTLPINQQGSVTR
QGVTVTVDNHQSCWIELAKDVRFLVLFHHYKHPSYLQMAHLGFYITDGRGLSASTQGLLG
QFQHADMSVTVVKDRVIGGARRTNKEGLLARGILRWGSEHMPVTLQDKTLKDTVRKRHLG
KCWVVPKAEIQRLLGHPYESYVVDHV
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atggacatgatgaatttaagaattcgttgcatcctagttttcttcactttttatgtgcaa
gagggattatcaggggattatgaagcacaccttggagcaaatattcttttacagagagta
aaacgtcaaagcagaccagcaaaaccagtgctgaaggtgacagactaccatgtcaggtgt
tcggtggtgtcccgctatgctgttaccacagtccagagctcagtatggaaccagctcccc
atcatcaaggaagctgcttttgaggtggatctgccctcctctgctttcatctccaacttc
tccatcacctctaatgggaaggtgtatgtggcccaggtgaaggaaagagctgctgccagg
aaaatatacgacgctgctaagaagcaaggaaaaacagctggacttgtcgctaccaaagag
cgggagattgagaagtttcgtgtggcagtgagcgtgccaccaggagctcggatgtccttc
tctctgtcctacgaagagctgttaccccggcgactgggccgctacgagctcagtctgggt
ctgaggcctggacaggctgtgcagaacctgacgttagatgtctgcataacagagcggacg
ggcatcagtttcatcaaagtccttcctctcaagacaaccagactgctctccaacacagca
aaaggtgattcagaccctcctccctccactcatgttgagcggagtgctggctgtgctaga
gttcgctacagtcccactctgcagcagcagaacagcgtctcctccaagggtcttgatgcg
gacttcgtcattcagtatgatgtgaacctcagagacctcataggtgacgtccaggtgtac
gatggctattttgtgcattactttgcacccagagggcttcctgtagttcctaaggatgtt
atatttgtcattgatgtcagcggctcaatgataggcaccaagataaaacagactaagcag
gccatgaccaccatccttggggaccttagagagggagaccacttcaacatcatcaccttc
tcagacaaggttcacacctggaagaaaggacgaacagtgcgggcaactcggaataatgta
cgagacgccaaagactttgtgaagaggattattgcagaaggatggaccaatatcaacgca
gctcttctttcagccgcccagctcgtcaaccctccatcctcaggctcctccaacctcctc
tcatctcgtcgagtacccctggtgattttcctcactgatggggaagccaccatcggagta
acagcaggtgacaccatcctcagtaatgccaagaaggccctaggctcagcctctctgttt
ggtcttgcctttggagacgatgccgacttcctcctcctgaaacgcctggctttggataac
cgaggcgtagctaggatggtgtacgaggatgcagatgcggccctgcagctgaaaggcttc
tatgatgaagtagccagccctttgctgtcagacatccagctgtcctacctggatgatcag
gcgtttgatatcacccgctccctgttcccaaactacttccaaggctctgagttggttgtg
actgggagggttagaccaggagtcaaagatttaaaagtgtcaatgtctgccactgattca
aagcaacatgtcaagatcgagaatgatgtgttgatttcccacgcaaagggggatgaaagt
gtagattcacttgactgttcaggtggtttagagggtatctctagctttgtgcatcgtctc
tgggcatatttcaccatcaaagagttgctactggccaaattgaatgctactgaccctgca
actcagagattattagcagacaaggccacaaatctctcccttaaatataactttgtaaca
ccagtcacctctttagttgtagtcaagccagatgcagacgaagcagctccaagtccaact
actgcaaaacccaccacagcagccactacaaccacaacagcaacaactactgctactagc
aaaatatcagctgcaggtgctgcaaagaagcccagcacaccttctaaccccaggcctaac
aaaacaaaaccaagccctccacagccacctccaaatataccacaaactaaaaaacactca
tcaccaacttccacagcaaaaacaggagtttcaccatcaaagaaaacaactacaacctca
agtcccagctccatcaaaactgccccagcacctctttctggtaaaaagcccactccctcc
caaaatgattctaaaaccgcctctcctccacctgctggaaagatagccatatctctcctt
aacgccctaaaaacagcgccaccacctgccccaggaaaagtgtccaccctgccgcccaac
gccatgaaaacaaccagtccctcagtgctaacattcaccaccacacctccactcagctca
gtcagaactgacccttcacctttgcctggcagacagctaaccccacagcccagcacagcg
aggacagttctccctgctgtcagagtgacagtgccctccacagaggcagagaacaacagc
acatctgctccagatgttcctcagcctggaatcgccactgctctgcctgagctctcgtct
ccgctcacctctccgacaccggcaccgtcaccggctgtggaagacaacaacacaaacaca
ggcgctgacacagacttcagcatcgccaccctggtgtcggccaccttcgctcccatgcct
ggtgtaacagatgggccacgactgtgggaggcagcagggcttctggatgtctctacttcc
attcagattcagagaaaagatattgaccttgtgaaagattatgaagctacttatgactac
gactatgatctcaactatgatgcctgggatgatactgccgacacaggatcattcgaatct
ccatccagactgagcaccgtgagggtcttctcctcatcagttgatggagatcctcatttt
gtggtccagctgccaaagctgcatcagagcctgtgtttcacagtagatggcagagctaat
gatgttctcagactgttagaggacccagacagagggaccattgtggatggccacctgata
gctgctccctccaagcatggcgctgaagaccgctcccgaacctacttcgaccacctcacc
atctccacagccacaggcggctctggtgacatcatgatcacagtctcattggatactgtt
gtggtggaaggggaagggcgggacacccttcccatcaaccagcagggatcagtgacgagg
cagggtgtgacggtcaccgtggacaaccatcagagctgctggatcgagctggccaaggat
gtgcggttcctggtcctgttccaccactataaacaccctagttacctacagatggctcac
ctgggtttttacatcacagatggacgggggctgtcggcctcgacacaaggtctactgggc
cagtttcaacatgctgacatgagtgtaacggtggtgaaggatcgtgtgattggaggtgct
cgccgaactaacaaggagggacttttagccagggggatcctgaggtggggctcagagcac
atgccagtcaccttgcaagacaagacgctgaaagacacggtgcggaaacgccacctgggc
aaatgctgggtggtgcccaaggcagagatacagagacttctgggtcatccatatgagagc
tacgtggtggatcatgtgtaa
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