Lates calcarifer (barramundi perch): 108890979
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Entry
108890979 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: cyclin-T1
KO
K15188
cyclin T
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108890979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcf03021
]
108890979
Transcription machinery [BR:
lcf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
108890979
Brd4/P-TEFb complex
108890979
7SK RNP complex
108890979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CycT2-like_C
Cyclin_N
TFIIB
Motif
Other DBs
NCBI-GeneID:
108890979
NCBI-ProteinID:
XP_018543589
UniProt:
A0AAJ7Q0N0
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All DBs
Position
LG6:24268801..24274853
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AA seq
724 aa
AA seq
DB search
MAASFRSLPASCNNKWYYTRQQIDNSPSRRAGLDPDKELSYRQQAANLLQDMGQRLNVSQ
LTINTAIVYMHRFYMVQSFTRFHRNVIAPAALFLAAKVEEQPRKLEHVIKVAHACLNPQE
PSPDVRSDAYLQQAQDLVILESIILQTLAFEITIDHPHTHVVKCTQLVRASKDLAQTSYF
MATNSLHLTTFCLQYSPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDPTVTLELLDE
LTHEFLQILEKTPSRLKRIRNWKAGGQTPKAKPKVQEEGDQRDTMMSMISMASSESTVAG
LMSLSAPPSASSSSSSMGDKERGASGSAQTWSGKGQAGSEQQQQQQQQQQQQQQQQQQQQ
QQQPPNHEVHAPAKVSLSEYRAKNADVLAAQKRKLENMEASVKRDYANAAQALIGQQQRK
EKQQQHHHQQSSSSSSDMSSPSPIILKIPLEKERHDRSSLKMRFPVAGGGGGGGGGGSGH
SSGSSSSTRGQDQDIKVRIRVPEKQRGSSGEEGKSRDKHRERSNHHHHHHHHHHHHSSSS
SASLSSSHKHSSSSSGTVGSSKKVPSDSSRTSSSSSSASRKRTHSQDPTAGSHPASKVSK
SSRNPYQLPSLSSSSGQTLGHGPDILPALGLPHHQGSYSHSKSDKTDTNGHGAAGGAQSN
EYQDTFEMLNSLLSAQGVQPSQPSMFEYRSQFGDYIYGSGSRGNNPRPPPLPSDPPPPLP
PLPK
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttcgtttcgttctctccctgcaagctgtaataacaaatggtactacacacga
cagcagatcgacaacagcccatctcggcgagctggacttgatcccgacaaggagctgtcc
tacagacaacaggcggcgaacctgctccaggacatgggacagcggctcaatgtgtcccaa
cttacaattaatacagccattgtgtacatgcaccgattctacatggtccagtctttcacc
agatttcacagaaatgttattgctcctgccgctctcttcctcgctgcaaaggttgaggag
cagccccgaaagctggaacatgttatcaaggtggcccatgcatgcctcaatcctcaggag
ccttcaccagatgtacgcagtgatgcctacctgcaacaagcccaagacctggtcattctt
gagagcataatactccagaccttggcttttgaaatcaccatcgaccacccgcacactcat
gttgtcaagtgcactcagcttgtcagagcgagcaaggatctggctcagacgtcatacttt
atggctaccaacagtctgcacttgaccacgttctgcctgcagtatagtccgcccgttgtg
gcctgcgtatgcatccatctcgcctgcaagtggtccaactgggagatccccgtgtccacg
gacggcaagcactggtgggagtatgtcgaccccacggtcaccctggaactgctggatgag
ctcacacatgagttcctgcagattctggagaaaacacccagccggttgaaacggattcgc
aactggaaggctggaggtcagacacccaaagccaagccaaaagtccaggaggagggtgac
cagagggacaccatgatgagcatgatctctatggcttcttcagagagtactgtggcaggt
ctgatgagcctctcagctccaccgtctgcctcttcttcttcctcatccatgggtgataag
gagaggggggcatctggcagtgctcagacctggagtggaaaaggccaggctggttctgaa
cagcagcagcaacaacaacaacaacaacagcaacagcaacagcaacagcagcagcagcag
cagcagcagccgcccaaccatgaagtccatgccccggctaaggtatctctcagtgagtac
cgtgccaagaacgcagatgttttggctgcccagaagaggaagctggagaacatggaggcc
agcgtgaagcgggactacgccaacgctgcccaggctctcattggtcagcagcagaggaag
gagaagcagcagcagcatcatcaccagcagtccagctcctcttcgtctgacatgtccagc
ccttctcccattattctgaaaatccccctggagaaggagaggcatgacaggagctctctg
aaaatgcgtttccctgtagcgggtggaggaggaggaggtggcggtggtggcagcgggcac
agcagcggcagcagcagcagcacccgaggtcaggatcaggacatcaaagtcagaatacga
gtgcctgagaagcagagggggagttcaggagaagagggcaagagcagggacaagcacagg
gaacggtctaatcaccaccatcatcaccaccaccaccatcaccaccattcttcctctagc
agtgcctcactttcctcctcacataaacactcatctagctccagtgggacggtaggaagc
agcaaaaaagtccccagcgactcctctagaacaagctcttcatcctcttctgcctcgcgc
aagaggacacactcccaggatcccacagcaggctctcaccctgcctcaaaagtcagcaaa
tcctctaggaatccctaccagctaccgtccctgtcttcctcctctgggcaaactctgggg
cacggtcctgacattcttcccgccctgggccttccccaccaccaggggagctactcacac
tccaaaagtgacaagacagacactaatgggcacggtgcagcgggcggggcccagtcgaac
gagtaccaggacacttttgaaatgctaaactctcttctgagtgcacaaggcgtccagccc
tcccagccgtccatgtttgagtacagatcccagttcggggactacatttacggcagtggc
tccagagggaacaaccccagacccccacccctgccttcagatccgcctccgccactgccg
cccttaccgaaatga
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integrated database retrieval system
