Lates calcarifer (barramundi perch): 108891020
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Entry
108891020 CDS
T04895
Name
(RefSeq) keratin, type I cytoskeletal 13
KO
K07604
type I keratin, acidic
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108891020
04147 Exosome [BR:
lcf04147
]
108891020
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
108891020
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
108891020
Exosomal proteins of other body fluids (saliva and urine)
108891020
Exosomal proteins of colorectal cancer cells
108891020
Exosomal proteins of melanoma cells
108891020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
DUF1796
ADIP
DUF4776
AIF-1
Motif
Other DBs
NCBI-GeneID:
108891020
NCBI-ProteinID:
XP_018543637
UniProt:
A0A4W6F9B4
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Position
LG11:complement(314024..318417)
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AA seq
428 aa
AA seq
DB search
MMSTMSTRRSMIGGGGMSSYSMSGGAGGSGIRVSQASRTFSAGGGFGLGSGSGAGFGAAG
SLGFGSGAGFGSGAGFGGGAGMDNSLIGNEKFTMQNLNDRLATYLAKVAALEKANAELEL
KIRQFVESKVGPTTRDYSAFFVTIADLQGKIQAAILAKGTVLLSIDNARLAQDDFRMKFE
NELSMRQSVEADIAGLKMLLGELGVAKTDLSMQIESLNDELVSMKKNHEEDLLSMRTQMT
GQVNVEVDAAPQEDLTKVMEEIREHYEGVAAKNRRDLESWFQTKTEALHKEVATTEMTLK
SSTSEVKEVKSQLQALEIELQSQMSLKASLEAQLAEIQARYASQMNGFQMMVSGMEEQLV
QLRADLERQGQEYQMLLDIKTRLEMEIAEYRRLLDGEGVGASLSSSSSSSSTVTTTTKVI
TKVIEETI
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccacaatgtccacacggaggtccatgattggcggcggcggcatgagctcctac
agcatgtcaggaggagcaggaggttctggcattagggtctcccaggccagcaggaccttc
tctgccggcggtggcttcggcctcggcagtggatcaggtgcaggttttggtgctgctgga
agcttgggcttcggcagtggtgcaggtttcggcagtggtgcaggctttggtggaggagca
gggatggacaacagcctgattggaaacgagaagttcaccatgcagaacctgaatgaccgc
ctggccacctacctggccaaggtggcagccctggagaaggccaacgccgagctggagctg
aagatcagacagtttgtggagagcaaggtcggacccaccaccagagactacagcgccttc
tttgtcaccattgcagacctgcagggaaagatccaggccgccatcctcgccaaaggaacc
gtgctgctgagcatcgacaacgccaggctggctcaggacgacttcagaatgaagtttgag
aacgagctgtccatgcgtcagtcagtggaggccgacatcgctgggctcaagatgctgctg
ggagagctgggagtggccaagaccgacctgagcatgcagatcgaaagcctgaacgacgag
ctggtgtccatgaagaagaaccacgaagaggacctgctgtccatgcgcactcagatgacc
ggtcaggtgaacgtggaggttgacgccgctcctcaggaggacctcaccaaagtcatggag
gagatcagggagcactacgagggcgtcgccgccaagaaccgcagagacctggagtcctgg
ttccagaccaagacggaggctctccataaggaggtggcaaccacagaaatgacattgaag
tcttcgacctcagaggtgaaggaggtgaagagtcagcttcaggctctggagatcgagctc
cagtcacagatgagcttgaaagcatctcttgaagcccagctcgctgagatccaggcccgc
tacgcctcccagatgaacggattccagatgatggtgagcggtatggaggagcagctggta
cagctgagggctgacctggagagacagggacaggagtaccagatgctgctggacatcaag
accagactggagatggagatcgcagagtacaggaggctgctggacggagagggagtcgga
gcttcattgtcatcctcttcttcctcctcctccaccgtcaccaccaccaccaaagtcatc
acaaaggtcattgaggagaccatctaa
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