Lates calcarifer (barramundi perch): 108891022
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Entry
108891022 CDS
T04895
Name
(RefSeq) syntaxin-1B
KO
K08486
syntaxin 1B/2/3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108891022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108891022
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108891022
Membrane trafficking [BR:
lcf04131
]
SNARE
Syntaxin (Qa)
Stx-PM
108891022
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
108891022
Exosomal proteins of other body fluids (saliva and urine)
108891022
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
AAA_13
Lzipper-MIP1
Dcst2
Relaxase_C
GNVR
Spectrin_Anc-1
VBS_C3G9
Lem25
ARM_ECM29
TolA_bind_tri
CAP_N
MTUS1_CCDC69_CC2
Motif
Other DBs
NCBI-GeneID:
108891022
NCBI-ProteinID:
XP_018543639
UniProt:
A0AAJ7Q0S7
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All DBs
Position
LG11:223321..275570
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AA seq
288 aa
AA seq
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MKDRTAELRSAKDSDDDEEVVQVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAI
LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
TLSRKFVEVMTEYNTTQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
KMDSQMTKQALNEIETRHTEIIKLENSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
DYVERAVSDTKKAVKYQSQARKKKIMIIICCVILGVVLASTIGGTLGF
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgtacggcggaactgcgaagcgctaaggacagtgacgatgatgaggaggtg
gttcaggtcgacagggaccacttcatggacgagttcttcgaacaggttgaggagatcaga
ggctgtatagaaaagctgtcggaggatgtggagcaggtcaagaagcagcacagcgccatc
ctggccgcacccaaccctgacgaaaagaccaagcaggagttggaggacctcacagctgac
atcaagaagacagccaataaagttcgttcaaaattaaaagcaatcgagcagagcatcgag
caggaggagggtctcaacagatcatcagcggacctcaggatccgtaagacacagcactcg
acgctgtcacgtaagtttgtggaggtgatgactgagtacaacaccacgcagtccaagtac
cgcgaccgctgcaaggaccgcatccagagacagctggagatcaccgggagaaccaccacc
aacgaggagctagaggacatgttggagagtggcaagctggccatcttcactgatgatatc
aaaatggactctcagatgaccaagcaggccctgaacgagatcgagacccgacacaccgag
atcatcaaactggaaaacagcatccgtgagctgcacgacatgttcgtcgacatggccatg
ctggtggagagccagggagagatgatcgacagaattgagtacaacgtggaacactccgtc
gactacgtggagcgagccgtatctgacaccaagaaggccgtcaaataccagagccaggct
cgcaagaagaagatcatgatcatcatctgctgcgtcatcctgggcgtggtcctggcgtcg
accatcggcggcacgctgggcttctaa
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