Lates calcarifer (barramundi perch): 108891110
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Entry
108891110 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: homeobox protein MSH-C
KO
K09341
homeobox protein MSX
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108891110
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
108891110
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
HTH_NDX
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108891110
NCBI-ProteinID:
XP_018543760
UniProt:
A0AAJ7VAQ3
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Position
LG16_LG22:complement(7223083..7225579)
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AA seq
256 aa
AA seq
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MAPQSCVMNPAQGSPPSTAPGETSPAEDRAAGGMGTDKLDLSPVRRCKTKKFDLPFSVES
LISDRPPGSNLHSPDPGSGCVRAEETECASPGGLYRSKPEALDSSDKESSPWFQAPYASP
PRLPSPTTCNLRKHKNNRKPRTPFTTSQLLSLERKFRQKQYLSIAERAEFSNSLSLTETQ
VKIWFQNRRAKAKRLQEAELEKLKLAAKPLLPAFAFPFPLSAPMAAPSLYAALNGPRPAL
PVPGLFSGPYGMYYLS
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggcacctcagtcgtgcgtaatgaatcctgcgcagggatcaccgccctcgactgctcca
ggggagacatcaccagctgaggaccgagccgctggtggcatgggaactgacaagctggac
ctatcacctgtcagaagatgtaagaccaaaaagtttgatctgcctttcagtgtggagtcc
ctcatatcagacaggccaccgggcagtaacctccactccccggatcccggctcaggctgc
gtccgggcagaggagaccgagtgcgcgtcaccggggggactttaccggtccaaaccagag
gcgttggactcgagtgacaaggaatcgagcccctggtttcaggctccttacgcatcccct
ccaagacttcccagcccgacaacttgcaatctacggaaacacaagaacaacaggaaaccc
agaactcccttcacgacctctcagcttctttctctggagaggaagttccgtcagaaacag
tacctctccatcgcggagagagcggagttctccaactccctcagcctcacagagacccag
gtcaagatctggtttcagaaccgcagagccaaggccaagagactgcaagaggccgagctg
gagaagctcaagctggccgcgaagccgctactgccggccttcgcctttcccttccccctg
agcgcacctatggccgcaccgtccctctacgcggccctgaacggaccgcggccagcctta
cctgtcccgggactattcagtggaccatatgggatgtactacttgtcttaa
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