Lates calcarifer (barramundi perch): 108891266
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Entry
108891266 CDS
T04895
Symbol
hdac9b
Name
(RefSeq) histone deacetylase 9-B isoform X1
KO
K11409
histone deacetylase 9 [EC:
3.5.1.98
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108891266 (hdac9b)
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
108891266 (hdac9b)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
108891266 (hdac9b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
108891266
NCBI-ProteinID:
XP_018543903
LinkDB
All DBs
Position
LG15:22054168..22095401
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AA seq
681 aa
AA seq
DB search
MELLNIVIQADCAVVINVWRYESPFGQLFANSCLLFYFHTLTHLQVALKARTMLPLHAEV
APDDGWSLTHSSSRRKPVDDVLSELTHVWRFRKVDIKPDVSLVVEPLSPLDLRTDLRMLG
PGSDPSMWERQLQQELLLIQKQQQIQKQLLISEFQKQHEKLTRQHQAQLQEHLKLQQELQ
AMKQQQELAEKERRLEQQQQQQQQNQQEKEQERHRREQHVSSLSLRGKERSRESAVASTE
VKQKLQEFLLSKSAKDPASNGANHSFIHHPKLWYTSSHHTSLDQSSPPLGGTSPTCQYTL
PSPIESKDDFPLRKTASEPNLKVRSRLKQKVAERRSSPMLKRRDGNIMTPYKKRALELMD
STPTNSAPGSGPSSPIGASSALGAENGPSSLPTTTKTERWPSQPRLFRPEGSVSMLSLYT
SPSLPNISLGLSTASSPISAAMGLKDRSTEIKHGLPGHLLGPVPLQTALESKVSPSHQAL
LQHLLQKEQMRQQKILSSGQSSMSSHPQSPLAMKDRPSSSRPKLPKHRPLNRTQSAPLPQ
NTLAQLVIQQQHQHFLEKQKQYQQQVHINKLLSKSIEQLRQPSAHLQESEEEQEEQQHGE
LLESMQEDRLPPGGVIRKHTLSSSSSSGSSAELPDAHCGVIRVKEEPIDSEDEALTNQSL
ESEQSAYLHQVKGRLVIRAMI
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggaattacttaacattgtaatacaagccgactgcgctgttgtaataaatgtatggcgc
tatgagtctccgtttggtcagctatttgctaacagctgcttattattctatttccacact
ctgactcatcttcaagttgcactaaaagcgagaaccatgctgccattgcacgcagaagtt
gctccggacgacggctggtcattgactcactcctcttcaagaagaaaaccagtggatgat
gtcctctcagaactcacccatgtatggaggtttagaaaagtggacattaagccagacgtg
tcattggttgtggagcccttatctcctttggacctgcgcacagatctgaggatgctgggg
ccaggctcggacccatcgatgtgggagaggcagctgcagcaggaactactcctcattcag
aagcagcagcagatccagaagcagctactaatcagcgagttccagaagcagcatgagaag
ttgacccgtcagcatcaggctcagctccaggagcacctcaagctccagcaggagctccag
gccatgaaacagcagcaggaacttgcagagaaggagcgtcgtctggagcagcagcagcag
cagcagcagcagaaccagcaggagaaggagcaggagaggcatcgacgagagcagcatgtt
tccagcctcagcctcaggggcaaggagcgctccagagagagtgcagtggccagtaccgag
gtgaagcagaaactccaagagtttctgttgagcaaatcagcaaaggaccctgccagtaat
ggagccaatcattctttcatccaccacccgaaactctggtacacgtcctcccaccacaca
tcactggaccaaagctctccacctctgggtggcacatcccccacctgccagtatactctg
ccatcacccatagagagcaaggacgacttccccttgaggaagacagcctctgagcccaac
ctgaaggtacgatcccgactgaagcagaaggtagcagagaggaggagcagtccaatgcta
aagagaagagatggaaacatcatgactccttacaagaagagggccctggagctaatggac
tctacaccaactaacagtgcccctggctctggccccagctctcccataggggcctccagt
gccttgggggctgaaaatggaccctcctctctgcctactaccacaaaaactgagagatgg
ccttcacagcccagactgttccgacccgagggctccgtgtccatgctgagcttatacaca
tctccctccttacccaacatctccttggggctttcgactgcatcctcacccattagtgct
gccatggggttgaaagacagatcaacagaaatcaagcatgggctgcctgggcatctcctg
ggtcctgtgccccttcagacagccctggagtctaaggtgagccctagtcaccaggctctc
ctccaacacctcctccagaaggagcagatgaggcagcagaagatcctctcctctggccaa
agctcaatgtcgtcccaccctcagtcccctctggccatgaaggatcgcccctccagcagt
cggcctaaactaccaaaacaccggcccttgaaccggacccagtcggctccactgcctcag
aacacactggcccaacttgtaatccagcagcaacaccagcacttcctggagaaacagaaa
cagtaccagcagcaggtccatataaataagctgctgtccaagtccatcgagcagttacgt
cagcccagcgcacacctgcaggagtcagaggaagaacaggaggaacagcagcacggagag
ctgttggagagcatgcaggaggataggctgccccctggaggagtcatccggaagcacacg
ctcagcagtagcagcagcagcggctcaagtgccgagctccctgatgctcactgcggggtc
atcagggtcaaagaggagccgattgatagcgaggatgaggctctgaccaatcagagctta
gagtcagagcagagcgcctatcttcaccaggtcaaagggaggctggtgataagagctatg
atctga
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