Lates calcarifer (barramundi perch): 108891273
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Entry
108891273 CDS
T04895
Name
(RefSeq) aryl hydrocarbon receptor-like
KO
K09093
aryl hydrocarbon receptor
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108891273
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108891273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
bHLH_NPAS4
HLH
PAS_9
PAS_4
bHLH_HIF1A
Ifi-6-16
Motif
Other DBs
NCBI-GeneID:
108891273
NCBI-ProteinID:
XP_018543898
UniProt:
A0A4W6C5X0
LinkDB
All DBs
Position
Unknown
AA seq
946 aa
AA seq
DB search
MPSATMQGNGGVYAVKKRKKPVQKVAKPPPLKTNPSKRHRDRLNVELDHLTSLLPFSEEV
RGRLDKLSVLRLSVGYLKVKSYFHVALQRNGTFARVASANGRNGQSVSLDGVSFSEGELL
LQALNGFVLVVTTDGTIFYTSPTTHDFLGFHQSDVVHQSVYDLIHMDDREMFRCQLHFAL
NPSKSDTDMRAEDGQCSSKTLSRDSQSFLPQYLPPENSSFLERSFCCRLRCLLDNTSGFL
ALNFTGRLKYLHLQGTAGADGTVAPPQLALFAIATPVQSPSVTEIRTKTLIFQTKHRMDF
APVGIDTRGKLVLGYTEVELVTTGSGYQFIHAADMMYCADNHLKMIKTGDSGFTFFRLLT
KTGHWLWVQASARIVFKEGRPDFIIARQKALTNEEGEEHLRQRRQQLPFSVATGEGVLYD
VSLDVFSISGPSGPAESTTEKPLDPASLLGSLRRQDHSLYTQPEMPSPQFPIFSQTEDTD
CEQAQSALEQAFMDSHALLSVPGQIQTLQKRYLKVDSTSEAMMDSLGQILGDIEDGGIEG
LEVEEMELKDWENTLLRMNKEKEDAERELNRTLANDVFSYVEEALRRETGGVVVEGSDQT
GCHVSGTINSLSIQGERPGFSNNERQSRTDMTSNQSGSGEQAQLGNIHGDASNSTGLNAA
SQTTSTQTPTQCRNSHHAHTSSLWPPSSSNHRCGNEMISTPSCLTRQCWPPSAPNLNNTH
SSHQSGLEAMDQSVEYSLNHTGSQQTYVGRQPQIPSVWQQQQQLPQSFHHHTLSHSSHTQ
SSVNSTAQSFQTQPPSGSCMYEKIEGRIPSAATVSTRQNRLLLGPSHSRGPTHVAGTTTN
GPPFTLSNPGMAAAGINQGTMTSQSTHMAACTDMGNISLGHLSGNDANVGTLGSEYPPEN
ASLQSSFFCWNSEAQIPKVPLSDVVDPFAFPALPTGSINLSQNTGP
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcgccaccatgcaggggaacggtggagtatacgcagtgaagaagaggaagaag
cccgttcagaaagttgcgaagcctccaccgttgaagaccaatccgtccaaacggcaccgg
gaccgcctgaatgtagagctggaccatctgaccagcctgctgcctttctctgaggaggtc
agaggtcgcctggacaaactgtctgtgctccggctcagtgtgggatacctcaaggttaag
agttacttccacgtggcactgcagagaaatggaacgtttgctcgtgtcgcctctgcaaac
ggcaggaatggacagtccgtgtccctggatggagtcagtttctcagagggagaactcctg
ctccaggctttgaatggttttgtgttggttgtgacgaccgatggcaccatcttctacaca
tccccgacgacccacgacttcctgggcttccatcagtcggacgtcgtccaccagagtgtg
tacgacctcatccacatggacgacagagagatgttcagatgtcagcttcacttcgccctc
aaccccagcaagtccgacacagacatgagagcagaagatgggcagtgtagcagtaaaact
ctgagcagagactctcagagcttcttgcctcagtacctccctccagagaactcctctttc
ttggaaagaagcttctgctgtcgccttcgctgcctcctggacaacacctctggattcctg
gctctgaacttcactgggcgtctgaagtacctgcatttacagggaactgctggggctgac
ggtactgtggctcctcctcagctggctctgttcgccattgccacacctgtacagtctcct
tcagtaacggagatccgcaccaagaccctcatctttcagaccaaacaccgaatggacttt
gctcctgtgggcatagacaccagggggaagctggttttgggttatacagaggtagagctg
gtcacaacaggctctggttatcagttcatccatgctgctgacatgatgtactgcgcagac
aaccacctcaagatgattaaaaccggagacagtggcttcacattcttcaggctgctgact
aaaacaggacactggttgtgggttcaggcctctgccaggatagtcttcaaggaagggagg
ccagacttcatcattgctcgtcagaaagctctcacaaatgaagaaggagaggaacatttg
cgccagagaaggcagcagctccctttcagtgttgccaccggtgaaggtgtcttgtacgac
gtttctctggatgttttctccatctcgggtccttctggccctgctgagtctacaacagag
aaacctctggatcctgcctcactcctgggatcccttcgccggcaggaccactctctttac
acccagccagagatgcccagtccccagttcccaatcttctcccaaacagaggacactgat
tgtgaacaagcccaatctgccttggaacaagccttcatggacagccatgctctgctcagt
gtgccaggtcagattcagactttacagaagaggtatttgaaagtggactccacatctgaa
gccatgatggactctttggggcagattttgggagatattgaggatggagggatagagggt
cttgaggtggaggagatggagctgaaggactgggaaaacaccctcctcaggatgaataaa
gagaaggaagacgcagagagggagctgaatcgcaccctggctaatgatgtgttctcatat
gtggaggaggctctgaggagagagactggtggggttgtggttgagggttcagatcagaca
gggtgtcatgtttcgggaaccatcaacagtttatccattcaaggtgagcgtcctgggttt
tcaaacaatgagcgccagtcaaggacggacatgacatctaaccagagtggatctggagaa
caggctcagttgggaaatattcatggcgatgcttctaattcgaccggactgaacgctgct
tctcaaacgacaagcacacaaacacccactcagtgtcgtaacagtcaccatgcacacacc
tcttctctgtggcctccaagcagcagcaatcaccgctgtggtaatgaaatgatttcaaca
ccatcctgtttgacgcgtcagtgttggcctccatctgcaccaaacctcaacaatactcac
agcagccatcaatctggcttggaggcaatggaccaaagtgtagaatattctctaaaccac
actggttcacagcagacttacgtggggcgacagcctcagatcccttcagtgtggcaacag
caacagcagctgccacaaagttttcaccatcacacactttcacattcctcacacacacaa
agcagtgtgaactcaacagctcagtcattccaaacgcagccaccatctggcagctgcatg
tatgaaaaaatagaaggtcgcataccgagtgctgctactgtttctaccagacagaacagg
cttctcttgggaccatcgcactccaggggacccacacatgttgcagggactaccacaaat
ggtccgcccttcaccctgtcgaatccaggcatggcagctgcaggcatcaaccaggggacg
atgaccagtcagagcactcacatggctgcctgtacagacatgggcaacatcagtttgggt
catctgagtggaaacgatgccaacgtgggaacacttggatcagaatatcctcctgaaaat
gcatcattacagtcttcattcttctgttggaacagtgaagctcagattcccaaagttccc
ctgagcgacgttgtggacccgtttgccttcccggcgcttcccactgggagcatcaacctt
tctcagaacaccggaccatag
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