Lates calcarifer (barramundi perch): 108891289
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Entry
108891289 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: crossover junction endonuclease EME1-like
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03440
Homologous recombination
lcf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108891289
03460 Fanconi anemia pathway
108891289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108891289
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108891289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
108891289
NCBI-ProteinID:
XP_050923648
UniProt:
A0AAJ8B1N7
LinkDB
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Position
Unknown
AA seq
413 aa
AA seq
DB search
MGSYSDPSSDLDEELPVFDFLSHGRHLSQTSKSHAEKPDLVDLDDSEEEDAAIASSVKDN
AGGYKRTTDVMMISSDSDDDAPYVPLAQRLKQRRDNVISASSAVTNGKDAEQYSPSDLAP
LQLSRQNRFPESEPPRSFCQVKTVSQGTSDGPEEAAALPQRRLPPKPFSTVGSADTSPAK
RKPAKRAVEEIQASREEARRRRQARERQQRDKEVLRLQQEREKAERKALAEAAKALRPEE
CIRHMVVAVDPALLQLEGGGTLLASVQALGCSCAIEKQPLPRSVSWMRRAPCAQPDDGVC
VPEAHVVMQMTVDDFITLIHSYIQEERPGRSDSGPTLTSWVQQQQRRHPGKILSLVVVDM
EKYFRSQKSQSQKRFREAVANEERGGGKARRRGRNGGAEALPEVSRVEVEEVG
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgggcagctacagtgaccccagcagtgacctagacgaggagttgcctgtgttcgatttc
ctcagtcacggtcgacacctcagccaaacctcaaagagccacgcagagaagcctgacttg
gttgacctggatgattcagaagaagaggacgcagccatcgcctcctcagtgaaggataat
gcaggcggatataagagaacgactgatgtaatgatgatcagcagtgattctgatgacgat
gcaccttatgtccctctggcacagagactcaaacagagacgagacaatgtgattagtgcc
tcctctgctgtcactaatgggaaagatgctgagcagtattcgccatccgatctggccccc
ttacagctctcccgccagaacaggtttccagagtcggagcccccacgcagcttctgtcag
gtgaaaacagtgagccaggggacctctgatgggccagaggaggcagcggctctccctcag
cgacggctgcctccgaagcctttctccactgtggggagcgctgacacctctcctgccaag
aggaaacctgccaagagggcggtggaggagatccaggcctccagggaggaggctcggagg
agaaggcaggccagggagagacagcagagggacaaggaagtactcaggctgcaacaagag
agagagaaagcagagaggaaagctctggcagaggctgccaaggccctgaggcctgaggag
tgtatcaggcacatggtggtggctgtggacccagctctcttacagctggagggaggtggg
actctgctggcgtcggtgcaggcgctgggttgcagttgtgccatagagaaacaacccctc
cctcgcagtgtcagctggatgaggagggctccctgtgcacagccagatgatggagtgtgt
gtaccagaggcccatgttgtgatgcagatgacagtcgatgacttcatcactctgatccac
agctatattcaggaggagaggcccggcaggtcagactctggtcccactctgacgtcgtgg
gtgcagcagcagcagaggcgtcaccctggaaagatcctcagcctggtggtcgtcgacatg
gagaaatacttcagatcccagaagtcacaaagccagaagaggtttcgagaggcagtcgcg
aatgaggagcgaggaggtggaaaagcgaggaggagagggaggaacggtggagctgaagct
ctacctgaggtgtcacgagttgaagtggaggaggtgggttag
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