Lates calcarifer (barramundi perch): 108891414
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Entry
108891414 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: F-box DNA helicase 1-like
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108891414
Enzymes [BR:
lcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108891414
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108891414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
F-box-like
F-box
AAA_30
PhoH
Viral_helicase1
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
108891414
NCBI-ProteinID:
XP_018544058
UniProt:
A0AAJ7Q198
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MEVAVKGKAKRRHLSANELEQSAEGTNALTQPHVLNQAHGHRDPNRGLYPRTPTKRQKCA
SASGSPAGIQRGINDYFSVTRVIHSSPNKSPKPCSSTCTNGLMEDDEDDDDDDVSLLAAP
LLPESQAKEVDEMDDASLLAAAMVTEPREEEEIDDASLLAAAVVPEEEEEEEEEEEEEEV
DYLEGMTAEMFGVDDEFNLCDSDIHNEEEEVEALPDAHYGLLGSSKVLQQPQGCIDDLPE
EVLREVLCLLPAQDLYRSVCLVCHRWRNIVQDTKFVPFKKQYYRYMMREKNTMQEILSIL
MNSGITNQAMRQHSIRHLVVLMAQHKVGERVNPEDVLRRVKKHRLFPQAEASMRLRIPDI
QKCFNLGIEGPNPYAAMAVILILSENVGDVQALVSLLTGCMSNTAITEYLSHMAMMLLSL
TRNSIQISDRLHYNIYYVLHLMENGPFSVSSSQSRRPQIQLTSEQQRVLSHDIQEDHVVK
IIAFAGTGKTTTLVKYAEHRPHLRFLYVAFNKSVACEAQRRFPRNVDCKTVHSLAYRDIG
LKXEYKFSPRXSPLTWNLKPFTISSVLPEGRGGFGKAKVVITTLNAFMASTDEHITIEHV
PFAHVTKTGNRMGINIAERPVHIICLVQDAQMIWEQNEGISNETKIEAYHMTHDGYLKLW
QLQEPRPCLSDKYDVIFIDESQDCTPRXSIMDVLLSQRCAKILVGDPHQQIYTFKGAVNA
LNVVDHTHIYYLTQSFRFGAEIAYVGATILKVCKKVEKILVGGKQKGGVCDETAVKVAEA
METGVSHNRGKIAILSRSNLSVFSVAVADGCQPQCRIHFIGNVKNIGLDKILDIWHLMKG
QEPDHQPRFIKDPLIRSFAKRSQTAFLALRTYIEQTEDLELGAKLNIVEKYRCRIPYNLG
LRTET
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggccgtcaaagggaaggccaagaggaggcacctgagtgcaaacgagctggaa
caaagtgcagaggggactaatgcccttacccagccccatgttcttaaccaggcgcatggc
caccgcgatcccaacagggggctttacccaaggacacccaccaagcgacagaagtgcgca
tctgcctcaggaagtcctgctggaatacagaggggtatcaacgattacttctctgtgaca
agagtcatccactccagtccgaacaaatcccccaagccctgctcctccacatgcacaaat
ggactaatggaggatgatgaggatgacgatgacgacgatgtcagcttgttagctgcccca
ttgctgccagagtctcaggcaaaggaggtggatgagatggacgatgcaagcttgttagct
gctgcaatggtgacagagcctcgggaggaggaggagattgacgatgccagtcttttagct
gctgcagtggtgccagaagaggaggaggaggaggaggaggaggaagaggaagaagaggtg
gattatctggaaggaatgacagcagagatgtttggagttgatgatgaatttaatctatgt
gacagtgacattcacaatgaggaagaggaggtggaggccctccctgatgcccactatggg
ctcctaggcagcagcaaagtcctgcagcagccccagggctgcatagatgaccttccagag
gaggtgctgagggaggtgctatgcctcctccctgcacaggacctctaccgcagtgtctgc
ctcgtctgccatcgctggaggaacattgtccaggacaccaagtttgtgccctttaagaaa
cagtactaccgctacatgatgagagagaagaatacaatgcaagagatcttatccatcctg
atgaacagcggcataacaaatcaagcaatgcgacaacacagcatacgacaccttgttgtt
ttaatggctcagcataaggtaggagagcgggtgaatccggaggacgttctgaggcgtgtt
aagaaacatcgcctttttcctcaggctgaggcttccatgagattacgtattcctgatatt
cagaaatgctttaaccttggcattgagggtccaaacccatacgcagccatggctgtgata
ctgatcctaagtgagaatgttggtgatgtgcaggccttggtgtctctgctcactggctgc
atgtcaaacaccgccatcacagagtacctcagccacatggccatgatgttactttcttta
acgaggaatagcatccagataagtgacaggttgcattacaacatctactacgtacttcac
ctgatggagaacggtcccttttctgttagctctagtcagagcaggcggcctcagattcag
ctcaccagtgaacagcagcgggtcctcagccatgacatccaggaagaccatgtggtcaag
atcatagcttttgcaggtacaggaaagacgaccacattggtgaagtatgctgagcatcgg
ccacacctccgcttcttgtatgtggccttcaataagtcagtggcttgtgaggcacagcgc
cgcttccccaggaacgtggactgcaagactgtccactcgttggcctacagggacattgga
ctgaagtgagaatacaagttttcccctcggtagtccccactgacctggaacctgaagcca
tttaccatcagctctgttctgcctgaaggccgaggtggctttggtaaagccaaagtagta
atcacaactctcaacgccttcatggcttcaacagatgagcacatcaccatcgaacatgtc
ccttttgcccacgtaactaaaactggcaataggatgggcataaacattgctgaaagaccg
gtacacattatttgtttggtccaggatgcgcagatgatctgggaacaaaatgaagggatc
tcaaatgagacaaaaatagaagcctatcacatgactcatgatggttaccttaagttatgg
cagctccaagaaccaaggccctgcctgtctgacaaatacgatgtcattttcatcgatgag
tcccaggactgcactcccaggtaatccatcatggatgtgctgctgtctcagcggtgtgct
aaaatcctggttggagatcctcaccagcagatctacaccttcaaaggagctgtcaatgcc
ctgaatgttgttgaccacacacacatctactacctgacacagagctttcggtttggtgct
gagatcgcttatgtgggtgccaccatcctaaaagtgtgcaagaaagttgagaagattctt
gtaggaggaaagcagaaggggggtgtatgtgacgagactgcagtcaaagttgcagaggct
atggagaccggtgtgagtcacaaccgggggaagatagccatcttgtcgagatctaatctc
agtgtgttcagtgtagctgtagctgacggatgccaaccacagtgccggatccacttcata
ggaaatgtcaaaaatatcggcctggataaaatcctggacatctggcatctgatgaagggc
caagagccagaccatcaaccaagattcatcaaggatcccctcattcgctccttcgcaaag
agaagtcaaactgccttcttagccctgaggacgtacatcgagcagacggaggacttggag
cttggggccaaactcaacatcgttgaaaaatatagatgtcgtatcccctacaacctggga
ttaaggacagagacataa
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