Lates calcarifer (barramundi perch): 108891465
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Entry
108891465 CDS
T04895
Symbol
dennd2b
Name
(RefSeq) LOW QUALITY PROTEIN: suppression of tumorigenicity 5 protein
KO
K20161
DENN domain-containing protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108891465 (dennd2b)
Membrane trafficking [BR:
lcf04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
108891465 (dennd2b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
Motif
Other DBs
NCBI-GeneID:
108891465
NCBI-ProteinID:
XP_018544093
UniProt:
A0AAJ7Q1D5
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All DBs
Position
LG2:1766789..1801506
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AA seq
1129 aa
AA seq
DB search
MTANKSSKAAPRAGGGKTPRDVPDRCQSTSPCPVLSASQGQSQQPVFSDSENSGKQSRYV
RTDGRFLVRAGWNGKTASLCSGASLTGDPDSQGRLTKSKSISCLDNRLSIYKPPAQTKSC
QESPGVQEQTGDLSAGGGLNGRPLSWSTLSLGPSPNQSHKRSLSLTRSVAGVPATTIRKK
ISEWECRRVALPRMSLCLDKRGGERVGGSEGCPSLLSSPCSEKTFDFKGVRRMSTAFSEC
SYTETEGEEGVSDKDGLGRFQKRIGKTESSGTFVRSLSARKETSAVLNRIQKIEQALKEN
PSPPPPRYLSNCYAPDKQRQKSFVIGDDLDSTCTSKRSSICSVATEPDAVSVSDKLSKLR
QRFSVSSARSESPEPPGQQTSVGTSVNPLPKPKRTFEYDAKRDQKDASPANGLPPNRASE
SPPPLPSTPAPSMTRTTKTKTRIQDRESCESEDAASVPSSYPSSPTENGTLTADARTRPS
SKSTLEENAYEDIVEKENPYEDVDLKRKSLGRKSCLLESSRSWTTMDRKLNSPPQLPSKP
SSQSLRLPGPSDRKSHRLSQLSKRYSHDEMLLLPQMGGSSSPCGLLDDSLCSTSDTLASH
RHWRIPKLVQRINSIYCTKRGKKRLKKLSMSNVETASLRDDNSESESDSDDRFKAHTQRL
LKLQSILRRAPSYRTLELQLIEWQERELFEYFVVVSLKKKPSKNSYSPEVTYQFPKLERP
TKQMREAEQRLKAIPQFCFPDAKDWSPVSEYTSETFSFMLTGEDGSRRFGYCRRLLPTGK
GPRLPEVYCVISRLGCFDLFSTILDEVERRRGISAALVYPFMRSLMESPFPAPGKIIKVK
TFLPGAGNEVIELRRPTDSRLEHVDFDSLFGCLSIRQVIRVFASLLLERRVIFVAEKLST
LSSCMHAVVALLYPFSWQHTFIPVLPGSMLDIVCCPTPFLVGLLSSSMPKLKELPVEEAL
MVDLGTDRFIRQMDDEASLLPRKLQAALEQALEQRNDIINQDSDSESDEEYNSLNSLVSE
AFIRFFLETIGHYSLFITQNERGERVFQREAFRKSVASKSIRRFLGVFMESQMFAGFIQD
RELRKTRAKGLFEQRVDQYLEELPDTEQSGVNKFLKGLGNKMKFLHKKN
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgactgccaacaagagttcgaaggctgcgcctcgtgcaggagggggtaaaactccacgg
gacgtccccgacaggtgccagtctacgtctccgtgtcccgttctctctgccagccagggg
cagagccagcagccggtcttcagcgacagcgagaactctgggaagcagagtaggtacgtc
cgcaccgacggcaggttcctggtacgcgctggctggaacggcaagacagctagcctgtgc
agcggcgcatctctcacaggtgaccccgactcccaaggccgcctcaccaagtcaaagagc
atcagctgcctggacaacaggctctccatctataagcccccggctcagaccaagtcctgc
caggaaagcccgggcgtccaggagcaaacaggggatctgtcagcgggaggtggactgaac
ggtcggcccctgagctggagcacgctctcactgggaccttcccctaaccaaagccacaaa
cgcagcctctctctcacccgttcagtcgcaggtgtccccgccaccacaatccgcaaaaag
atctcagaatgggagtgcaggcgggtggctctgcctaggatgagcttgtgtctggataaa
agaggaggggagcgcgtcgggggcagcgagggctgcccgagcctgctctcctctccctgc
agcgagaagacttttgactttaagggggttcgcaggatgagcacagcgttctccgaatgc
tcctacacagagacggagggagaggagggtgtttcagacaaagacggcctgggccgcttc
cagaaaaggataggcaagacggagtcctcaggaacattcgtacgttccctgtctgctcgg
aaggagacgtcagccgtcctcaacaggatacaaaagatagagcaagccctgaaggagaac
cccagcccgccccctccacgctatctgagtaactgctatgctccagacaagcaaagacag
aagtcttttgtgataggtgacgacttggacagcacatgcaccagtaagcgcagcagtatt
tgctcagttgccaccgagcccgacgctgtctctgtgtctgataagctctctaaactcaga
caaaggtttagtgtgagctctgccaggtctgagagtccagaaccaccgggccagcagacc
tctgttggcacgtcggtcaaccccttaccaaaacccaaacgcacttttgaatacgacgcc
aaacgggaccagaaagatgcgtcaccagccaatggactacctccaaacagagcctccgag
tctcccccgcctctgccctccaccccggcacccagcatgacacggacgacaaagaccaag
acaagaatccaggacagagagtcgtgtgagtcagaggatgctgcgagtgtaccctcttca
tatccgtcctcacctacagagaatggcacgctgaccgcagacgctcggactcgacccagt
tccaaaagcactttagaggagaacgcctatgaggacatagtagagaaggagaacccatac
gaggatgttgacctgaagcggaagagtttgggtcggaagtcgtgcctgttggagagcagc
aggtcttggacgaccatggacaggaagctgaactctccacctcagctgccttccaaaccc
agtagccagtcccttcgcctcccgggtccgagcgacaggaagagccaccggctgtcacag
ctgtccaaacgctacagccacgacgagatgctgcttctcccccagatgggtggatcgtct
tcaccttgtggcctgctggacgacagcctctgtagcaccagcgataccctggcctcacac
cggcactggaggatccccaagctggtccagaggatcaactccatttactgcactaaacgt
gggaagaagaggctgaagaagctgtccatgtccaatgtcgagactgcatctctgagagat
gacaacagcgagagcgagagcgactctgacgacaggttcaaagctcacacccagaggctg
ctgaagctgcagtccatcctgcgacgggcccccagctaccgcacgctggagctgcagctc
attgaatggcaggagagagagctctttgagtattttgtggtcgtttcacttaagaagaaa
ccaagtaaaaactcctactccccagaggtcacctaccagttccccaagttagagagaccc
accaagcagatgagggaggcagagcagaggctcaaagccatccctcagttctgtttccca
gatgctaaagactggagtcctgtctctgagtacaccagtgagaccttctccttcatgctg
actggcgaggacggcagcaggaggttcgggtactgcagacgcctgctgccgactgggaaa
ggacctcgccttccagaggtgtactgtgtcatcagcaggttgggctgttttgacttgttc
tccacgatcctggacgaggtggagagacggagaggcatctcagcagccctggtctatccc
ttcatgaggagtctgatggagtcgcccttccctgcaccagggaagattatcaaagtaaag
acctttctgcctggtgcaggaaacgaggtcatcgagctgaggcggcccaccgactccaga
ctggagcacgtggactttgacagtctgttcggatgcctcagcatacggcaggtgatccga
gtctttgcctcgctgctgctggagcgtagagtcatctttgtggctgagaaactcagtact
ctgtccagctgcatgcacgcagtggtggctctgctctacccattctcctggcaacacacc
ttcatccctgtgctgccagggtccatgctggacatcgtctgctgtcccacccccttcctg
gtcgggctgctgtccagctcgatgcctaaactgaaagagttgcctgtagaagaggcttta
atggtcgacctcggaaccgaccgattcatccgacagatggacgacgaggcctcgctgttg
ccgcggaaacttcaagcggctcttgagcaagcgctggagcagaggaatgacatcatcaat
caggactctgacagcgagtcagacgaagagtataactccctgaacagcctggtgtcagag
gccttcatccgcttcttcctggagaccatcggacattactccctgttcatcactcagaac
gagcgtggagaacgcgttttccaaagagaggccttccgcaagtctgtggcgtcgaaaagc
atccgtcgtttcctcggtgtcttcatggagtctcagatgtttgcagggttcattcaggat
cgagagctgaggaagacccgggctaaaggtctgttcgagcagagggtggatcagtatctg
gaggagctcccagacacagagcagagcggagtcaacaagttcctcaaaggcctcgggaat
aaaatgaagtttctccacaaaaagaactga
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