Lates calcarifer (barramundi perch): 108891556
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Entry
108891556 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: C-C chemokine receptor type 6
KO
K04181
C-C chemokine receptor type 6
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108891556
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108891556
04030 G protein-coupled receptors [BR:
lcf04030
]
108891556
04050 Cytokine receptors [BR:
lcf04050
]
108891556
04090 CD molecules [BR:
lcf04090
]
108891556
Cilium and associated proteins [BR:
lcf03037
]
Motile cilia and associated proteins
Sperm associated proteins
108891556
G protein-coupled receptors [BR:
lcf04030
]
Rhodopsin family
Chemokine
CC Chemokine
108891556
Cytokine receptors [BR:
lcf04050
]
Chemokine receptors
CC Chemokine
108891556
CD molecules [BR:
lcf04090
]
Proteins
108891556
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
108891556
NCBI-ProteinID:
XP_050927575
LinkDB
All DBs
Position
LG7_1:complement(480339..487328)
Genome browser
AA seq
401 aa
AA seq
DB search
MDFSEGEIALDPDYADYYNDNLEEPCSYQNNHRLEQVVGPYVHSIICILGFIGNSLVIIT
YAFYKRTKSMTDVYLLNVAIADLLFVVALPLIVYNELTSWSMGPVACKLLRGSYSVNLYS
GMLLLACISGDRYIAIVQARRSFRLRSLPYSRVICAVVWIFAILLSVPTFYFYNWYEPSH
NNLMLGTNMTDMFDGEGTNLTNFWDIFMLGGQDEXQTSRTPQYVCEFRFESNNTALSTKV
AIPSTQLAVGFFLPLLIMISCYTAVIITLLKARNFQRHKAVRVVLAVVLVFIACHLPYNI
TLLYDTVNMFQQGECEVLDNLQVAKTVTQTIAYLHCCLNPVLYAFVGVKFRNHFRRIMQD
LWCLGKRYIAPRRFSRVTSEIYVSTRRSVDGSSENGSSFTM
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggacttctcagagggtgaaattgcacttgacccagattatgcagattattataatgat
aacctggaagaaccttgttcttaccagaacaaccacaggctggagcaggtggtcggtccg
tacgtccactcaatcatctgcatcctgggcttcattgggaacagcctggtgatcatcacc
tatgccttctacaaaaggaccaagtccatgactgatgtctacctgctcaacgtggccatc
gcagacttgctgttcgtggtggcgctgcctctcatcgtctacaacgagctgacatcgtgg
tcgatggggccggtggcctgtaagctgctgcgtggctcctacagtgtgaacctgtacagc
ggcatgctgctgcttgcctgcatcagcggcgaccgctacatcgccatcgtccaggcccgt
cgcagcttcagactgcgctcactgccctacagccgggtcatctgcgccgtcgtctggatc
tttgccattctgctgtccgtccccaccttctacttctacaactggtacgagccgtcccac
aacaacctcatgttggggaccaatatgaccgacatgtttgatggagaggggaccaatctg
accaacttctgggacatcttcatgctgggtggacaggacgaanntcagacttccaggact
ccacagtacgtctgtgagttcaggttcgagagcaacaatacagccttgagtaccaaagtg
gccatccccagcacccagctggccgtgggcttctttctgccgctgctcatcatgatctcc
tgctacaccgctgtcatcatcacgctgcttaaagccaggaacttccagaggcacaaggcg
gtgcgggtggtgctggctgtggtgttggtgttcatcgcctgccacctgccctacaatatc
acactgctttatgacaccgtcaacatgttccagcagggggagtgtgaagtgttggacaac
ctgcaggtagccaagacggtgacacagaccatcgcctacctgcactgctgcctgaacccg
gtactgtatgccttcgtcggggtgaagttcaggaaccacttcagaaggatcatgcaggac
ctgtggtgtctggggaagaggtacatcgccccacgccgcttctccagggtcacctccgag
atctacgtgtccactcgccgctcggtggatggatccagtgagaacggctcgtctttcacc
atgtga
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