Lates calcarifer (barramundi perch): 108891567
Help
Entry
108891567 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2b
KO
K12488
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108891567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108891567
Membrane trafficking [BR:
lcf04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
108891567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
BAR_3
Ank_2
PH
Ank
SH3_9
SH3_1
Ank_4
SH3_2
Ank_5
BAR
Ank_3
YscO
TerS_C
PH_13
Motif
Other DBs
NCBI-GeneID:
108891567
NCBI-ProteinID:
XP_018544258
UniProt:
A0AAJ7Q1K0
LinkDB
All DBs
Position
LG7_1:605678..623494
Genome browser
AA seq
1008 aa
AA seq
DB search
MPELISVTEFIAETNEDYKAPTTSSFSTRMSHCRNTVAALEEALDVDRSVLYKIKKSVKS
INTSGQNHVDNEEQYIQSMEKFGDNLVCRDDAEVGSAFLKFAVFTKELSALFKNLLQNMN
NIITFPLDSLLKGDLKGVKGDLKKPFDKAWKDYETKLAKIEKEKREHAKQHGMIRTEFSG
GEIAEEMEKERQLFQLQMCEYLLKVNEIKTKKGIDFLQNLIKYFHAQCNFFQDGLKAVES
LRPSVEKLATDLTAIKQSQDGERKQLTQLRDVLKASLQSEQKEDSQAKQNAGYSLHQLQG
NKAYGTEYSGVLYKKSEGLRKVWQKRKCSVRNGFLTICHGTPNRPPAKLNLLTCQVKRNP
DEKKSFDLFSHDRTYHFQAEDEAECQVWVSVLQNSKEEALNKAFKGDQDEGENNIVQELT
KAIVGEVKRMSGNDGCCDCGAPAPTWLSTNLGVLICIECSGIHREMGVHYSRIQSLDLDV
LGTSELLLAKNVGNASFNEIMEADLSQQDVTKPNPSSDMQMRKDYITAKYTEKRFARRRC
ADAASRLQVLYEAVRNRDILSLIQVYAEGVDLMEAIPQPNEHEPGETVLHLAVRMVDRNS
LHIVDFLAQNSANLDKQTTRGSTALHYCCLTDNSECLKLLLRGKASTSITNEAGETALDI
ARRLRHTQCEELLTQAQTGKFNVHVHVEYEWRLQNEDLDESEDEMEDKPIPNRREERPVS
CIVPGSGPMQPNLTALARDAACLVRDKHRPQVPSTIISNETYGTMLDLNLPPPGPTPPLP
PRAPHRGHGKPPAVDTVGRQRSSSDPPNPQTPERNSSMYVLPAAPPPVNKKPSVMDAKPV
SARNTPLPPLPPPPAPAIPPPPSIPPPPHYKAPPLPPPVPSHQTRPSGPPGPKSPKSPKS
PTGSVKRPPQRPPVRTPSVDKRGSQSKSPQTPTPPTPKPRTAFSKLKPQRVKAIYNCSAD
NPDELTFTEGEVIVVEGEEDSEWWIGHIEADPSRRGVFPLTFVHFITE
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctcatctctgtcaccgagtttatcgcagagactaatgaggactacaaagct
ccgaccacgtccagtttcagtacccggatgtcccactgcaggaacacggtggctgctctg
gaggaggctctggacgtggaccgatcagttctgtacaagatcaagaagtcggtgaagtcc
atcaacacgtctggtcagaatcatgtggacaatgaggagcagtacatccagtccatggag
aagtttggagataacttagtttgcagggacgacgctgaggttggttccgccttcctcaag
ttcgccgttttcactaaagagctgtctgcgctcttcaaaaacctgctgcaaaacatgaac
aacatcatcacctttcctctggacagtctgctgaagggagacctgaaaggagtgaaaggg
gatctgaagaagccgttcgataaagcctggaaggattacgagaccaaactagcaaagatc
gagaaggagaagagggagcacgccaagcagcacgggatgattcgcactgagttcagcgga
ggagaaatcgcagaggagatggagaaggagagacaactctttcagctgcagatgtgtgag
tatctcctcaaagtgaacgagatcaaaacgaagaaaggcatcgacttcctccagaacctc
atcaagtattttcacgctcagtgcaatttcttccaggacggactgaaagctgtggaaagt
ctgagaccctcagtagagaaactggccacagacctgaccgcgattaaacagagtcaggat
ggagagaggaagcagttgactcagctccgagacgtcctgaaggcctcactgcagtctgaa
cagaaagaggactctcaggcgaagcagaacgcaggttacagcctccatcagctgcaagga
aacaaagcctacggcaccgaatactccggagtcctctacaagaagagtgagggactgagg
aaggtgtggcagaagaggaagtgctcggtgaggaacggtttcctcaccatctgccacggc
acgcctaacagacctccagccaaactgaacctgctcacctgccaggtgaagaggaacccg
gatgagaagaagagcttcgacctgttctcacacgacagaacctaccacttccaggccgag
gacgaggcggagtgtcaggtctgggtgtcggtgctgcagaacagtaaggaggaggctctg
aacaaagccttcaaaggagaccaggacgaaggagagaacaacatcgtccaggagctgacc
aaggccatcgtcggagaggtgaagaggatgagcggcaacgacggctgctgcgactgtgga
gcgcctgcccccacctggctgtccaccaaccttggtgtgctgatctgcatcgagtgctct
gggatccacagagagatgggggtccactactccaggatacagagtctggacctggatgtc
ctgggaacctctgagctgctgttggcgaagaatgtgggaaacgccagcttcaatgagatt
atggaggcagatctgtcgcagcaggacgtcaccaaacctaatccgagcagcgacatgcag
atgaggaaggactacatcacagccaagtacaccgagaagcgttttgctcggcggcgttgt
gctgatgccgcgtccaggctgcaggttttatacgaggccgtcaggaacagggacatcctg
tctctgatccaggtctacgccgagggggtggacctgatggaggccatccctcagcccaat
gaacacgaacctggagagacggtgctccacctggccgtccgaatggtcgacaggaactcc
ctccacatcgtcgacttcttggctcagaacagtgcgaacctggacaagcagacgaccaga
ggaagcacagctctgcattactgctgcctgaccgacaacagcgagtgtctcaaactgctg
ctgagaggaaaagcctcaacctccatcacaaacgaagcaggagagacggcgctggacatc
gccagacgcctccgacacactcagtgtgaagaactgttgactcaggctcagaccggaaag
tttaatgtccacgttcacgtcgagtacgagtggcgtctccagaacgaggacctggacgag
agcgaggacgagatggaggacaagcccatcccgaaccgtcgtgaggagcgtccggtcagc
tgcatcgtgcccggcagcggccccatgcagcccaacctgacggcactggcccgggacgcc
gcctgcctggtccgggacaaacacaggcctcaggtccccagcaccatcatcagcaacgag
acctacggcaccatgctggacctgaacctgccgccaccgggaccgacgcccccgctgccc
ccccgagctccacacagaggtcacggtaaacctcctgccgtggacaccgttggaagacag
aggtcgtcctctgacccccccaaccctcaaacccctgagaggaactcctccatgtacgtt
ctcccagctgctcctcctccagtgaacaagaagcccagtgtgatggacgccaagcctgtg
tcggccaggaacacccccctcccccctctgcctcctccaccggcaccggcaatcccacct
ccaccctccatcccaccaccaccccactacaaagctccacctctgccccctccagtcccc
agccaccagaccagaccatcaggaccaccgggacccaagtctcccaagtctcccaaatca
cccaccgggtcagtgaagcgtcctccacagagacctcctgtcaggactccatctgtggac
aaacgaggttctcagtccaagtctcctcagactccaactcctccaacacccaaacccaga
actgctttctctaagctcaagcctcagagagtgaaggccatctacaactgttcggctgat
aatccagacgagctgacgttcactgagggggaggtgatcgtggtggagggggaggaggac
agcgagtggtggatcggtcacattgaagcagatccaagcagacgaggagtgtttcctctc
accttcgtccacttcatcacagagtga
DBGET
integrated database retrieval system
