Lates calcarifer (barramundi perch): 108891596
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Entry
108891596 CDS
T04895
Symbol
srp54
Name
(RefSeq) signal recognition particle 54 kDa protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03060
Protein export
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
108891596 (srp54)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lcf02044
]
108891596 (srp54)
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
108891596 (srp54)
Secretion system [BR:
lcf02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
108891596 (srp54)
Eukaryotic Sec-SRP protein
108891596 (srp54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
cobW
nSTAND3
CbiA
AAA_33
DUF2209
NPHP3_N
ResIII
SRPRB
AAA_17
MeaB
nSTAND_NTPase5
AAA_22
APS_kinase
MobB
AAA_30
AAA
AAA_19
PduV-EutP
Zeta_toxin
nSTAND_NTPase7
6PF2K
ATP_bind_1
Thymidylate_kin
AAA_16
AAA_18
Torsin
ArsA_ATPase
Motif
Other DBs
NCBI-GeneID:
108891596
NCBI-ProteinID:
XP_018544302
UniProt:
A0A4W6FD23
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKSAI
DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK
LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIASEGVEKFK
GENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACESQAKAFKDKV
DVASVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI
EGLIDRVNELKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTDFM
SKGNEQESMSRLKKLMTIMDSMNDQELDSKDGAKLFSKQPNRIQRVARGSGVATRDVQEL
LTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDPRVLHHMGGMAGL
QSMMRQFQQGAAGNMKGMMGFNNM
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggtgttagccgacctggggaggaagatcacctcggcgctgaggtccctcagcaacgcc
accatcatcaatgaagaggtgttaaacgccatgttgaaggaggtgtgtgctgctctgctg
gaggccgacgtcaacatcaaactcgtcaaacagctgagagagaacgtcaagtctgccata
gatctggaggagatggcctcaggtctgaacaagaggaggatgatccaacacgccgtcttc
aaggagctcgtcaagctggtcgaccctggggtgaaagcctggactcccactaaagggaag
aacaatgtcatcatgttcgttggtctgcagggcagtgggaagactacaacctgctccaag
ctggcgtattattaccagaggaaaggctggaagacctgtctgatctgtgccgacactttc
agagctggtgccttcgatcagctgaaacaaaacgccaccaaagccagaatccccttctac
ggcagttacacagagatggacccggtggtgatcgcctctgagggcgtagagaagttcaaa
ggtgaaaactttgagatcatcattgtggacacgagtggacgacacaaacaggaagactcg
ctgttcgaggaaatgttacaagtctccaatgctgtgcaaccagacaacattgtgtatgtg
atggatgcgtcgatcggtcaggcctgcgagtctcaggctaaagcctttaaagacaaagtg
gacgtggcgtcagtgatcgtcaccaaactggacggacacgccaaaggaggaggagctcta
agcgccgtggcagccaccaggagtcccatcatcttcatcgggaccggagaacacatcgat
gacttcgagccatttaagactcagccgttcatcagcaaactgctcggaatgggcgacatc
gaaggattgatcgacagagtgaacgagctgaaactggatgataatgaggagctgatcgac
aaactcaaacacggtcagttcactctcagagacatgtacgagcagtttcagaacatcatg
aagatgggacccttcggacagatcatggggatgattcccggcttcggtacagattttatg
agtaaaggaaatgaacaggaatcaatgtccagactgaagaaactgatgaccatcatggac
agcatgaacgaccaggaactggacagtaaagacggggcgaagctgttcagtaagcagccc
aacaggatccagagagtggctcgggggtcaggagtcgccaccagagacgtccaggagctg
ctgacccagtacaccaagttcgcccagatggtgaagaagatggggggcatcaagggactg
ttcaaaggaggagacatgtccaagaacgtgaacccgtctcagatggccaaactgaaccag
cagatggccaagatgatggacccccgagtcctgcaccacatgggtggaatggcaggtctt
cagtccatgatgcgtcagtttcagcagggagctgccgggaacatgaaaggcatgatggga
ttcaacaacatgtga
DBGET
integrated database retrieval system
