Lates calcarifer (barramundi perch): 108891639
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Entry
108891639 CDS
T04895
Name
(RefSeq) ER membrane protein complex subunit 1
KO
K23562
ER membrane protein complex subunit 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108891639
Membrane trafficking [BR:
lcf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
ER membrane protein complex
108891639
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EMC1_C
PQQ_2
PQQ
Beta-prop_FAM234A_B
Motif
Other DBs
NCBI-GeneID:
108891639
NCBI-ProteinID:
XP_018544382
UniProt:
A0AAJ7Q1U7
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All DBs
Position
LG6:9353962..9364174
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AA seq
962 aa
AA seq
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MAKLILLCLKFTILCGTIEAVFEDQVGKFDWRQQYVGKVRFSHFDTHVQSSKKVLLATEK
NVFAALNTRTGELFWRHVDKTGPEGNIDALLQHGQDAVLVVGNGRLLRSWEINVGGLNWE
IVLDSGSFQSACLVGQQDTVKHVAVLKKTAISLHYLSNGHQKWIENLPESETVDYQAVYS
GGNGEVYALGLVPHSHITIVAYSVEDGEIIKQISVEAPWLSNIQASCAVVGQGILTCVDS
ATVSLYILDLHMQSQMTQIPLQSLGLEAAPGFHPALMSTQPNPARPPLPEFFLQLGPEHY
LLLQLNNGQIVTLRDFKPAMLVSFATTGEKTVAAVMSPKNKTACSLNLFSAETGRRLLDT
TLIFNVDPNGGKPEKLYVQAFLKKDDSVGYRVMVQTEDHTLTFLQQPGRVMWTREEALSD
VVTMEMVDLPLTGTQAELEGEFGKKADGLMSMVLKRLSSQFILLQAWIGHLWKLFYDARK
PRSQVKNDVTIENLSRDEFNLQKMMVMVTASGKLFGIDSKTGSILWRHYLDNIPSNAAFK
LMVQRTTAHFPHPPQCTLLIKDKDTGLATLHVFNPIFGKKSHITPPTLPQPILQSLMLPL
MDQDYAKVLLLVDDQYKVSAFPSTKNVLQQLQEMASSIFFYLIDSAQGRLSGYRLRMDLS
TELIWEVVIPTEVQRIVSVKGKRPNEHVHSQGRVMGDRSVLYKYLNPNLLAVVTESTDLH
QERSFVGILLIDGVTGRIFHEAVQRKARGPVHVVHSENWVVYEYWSTKSRRNEFSVIELY
EGMELYNSTVFSSLDRPHAPQVLQQSYIFPSSISTMEATLTEKGITSRHLLIGLPSGGIL
SLPKMFLDPRRPEIVSEQSREENLIPYAPELLIRTEWFINYNQTVSRVRGIYTAPSGLES
TCLVVAYGLDIYQTRVYPSKQFDVLKDDYDYMLISSVLFALFFATMISKRLAEVKLLNRA
WR
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagctaattttgttgtgcctgaaatttactattttatgcggcactatcgaggct
gtgtttgaggatcaagtaggaaaatttgactggaggcaacaatatgtaggcaaggttcgt
ttttctcattttgacacacacgtgcagtcatccaaaaaggtgcttctggcaacagagaag
aatgtttttgctgcactcaacaccaggactggagaactcttctggcgacatgtggataag
acaggaccagagggaaacattgatgctctcctgcaacatggacaagatgcggtgctggtg
gttggtaatggccgtctgctgcgctcctgggagataaatgtgggtggtttgaactgggag
attgtgcttgactctggcagtttccagtccgcatgtttggttggacagcaagacacagtg
aaacatgtggctgtcttgaagaaaactgccatatctctacattacctttctaacggtcat
cagaaatggatagagaatcttccagaaagtgaaactgtggattaccaggctgtgtattct
ggtggaaatggtgaagtttatgcactgggactcgttccccattcccacattactattgtt
gcttacagtgtggaggatggagagataatcaagcagatctcagtcgaagctccgtggctg
tctaacatacaggccagctgtgcagtggtcggccaggggattttgacatgtgtagactct
gcaactgtgtccttgtacattcttgatttacacatgcaatcacagatgacccaaatcccc
ctacagtcactgggacttgaagctgcccctggcttccatccagcactgatgtccacccag
cccaacccagctcggccgccgctgccagagttcttcctccagctcgggccagaacactac
ctgcttctccagctcaacaatggtcagattgttacactgagggatttcaagccggcaatg
ctggtttcatttgctaccactggagagaagactgttgctgctgtcatgtcacccaagaat
aaaactgcttgcagtcttaacctctttagtgcagaaactggacgcagacttctcgacaca
acactaatttttaatgtggaccctaatggtggcaaaccagagaagctgtatgtacaggca
ttcctcaagaaagacgactctgttggctacagggtcatggtgcagacagaagaccacaca
ctcactttcttacaacagccagggcgtgtaatgtggacaagagaagaggccctgtcagat
gtggtgacaatggaaatggtggatctgcccctgacaggaacgcaggcagagctggaggga
gagtttggcaaaaaggctgacggccttatgtccatggtgctgaagaggctctcctctcag
ttcatcttgctgcaggcctggatcggccacctctggaagctgttctatgacgcacggaag
cctcgcagtcaagttaaaaatgatgtgaccatcgagaatctgtccagagatgagttcaac
ttgcagaagatgatggttatggttactgcatctgggaagctctttgggattgacagcaag
actggcagcattttgtggaggcactacctggacaacatcccatcgaatgcggccttcaaa
ctcatggtgcaacggacaactgcacacttccctcatcccccacagtgcacactactcatc
aaagacaaggacacaggcctggccacactccatgtatttaaccccatctttgggaagaag
agtcacatcactccacccactctgcctcagccgatacttcagtcactcatgctgccactc
atggaccaggattatgctaaagtcctgcttcttgttgatgaccagtacaaggtgtctgcc
tttccctctacaaagaatgtactgcagcagctccaggagatggcctcatccatattcttt
taccttattgactctgcccagggaagactttctggctacaggctacgaatggacttgtcc
actgagctgatctgggaggttgtcatcccaactgaggtgcagaggattgtttcggtcaaa
gggaaaaggcccaatgagcatgtgcactctcagggcagagtaatgggagaccgtagtgtc
ctgtataagtacttgaaccccaatctactggcggtggtgactgagagcacagacttacat
caggagcgcagctttgttgggatcctgttgattgatggcgtgactggtcgcatcttccat
gaggctgtccagagaaaggccagaggaccggtacatgtcgtgcactctgaaaactgggtg
gtgtacgaatactggagtaccaagtctcgcaggaacgagttctctgtaatcgaactgtat
gaaggaatggagctctacaacagcactgtgttcagctcactggatcggccacatgctcct
caagtgcttcagcaatcttacattttcccctcctccatttctaccatggaggccactctg
actgagaagggcattaccagccgccatctgctcattggcttaccatcaggagggattttg
tcattgcccaagatgttccttgaccctaggaggccagaaatcgtgtctgagcaaagccgt
gaagagaacctgataccctacgcaccagagttactgatccgtacagagtggtttatcaac
tacaatcagactgtatcaagagtgcgaggaatttacactgccccctctggcctagagtcg
acctgtctggtggtggcatatggtctcgacatctaccagacacgtgtgtatccgtcgaag
cagtttgacgtactaaaagatgactacgactacatgctgatcagcagcgtactttttgct
cttttcttcgccaccatgatcagcaaacgcctggcagaagtcaaactgctcaaccgggcc
tggcggtaa
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