Lates calcarifer (barramundi perch): 108891642
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Entry
108891642 CDS
T04895
Symbol
l3mbtl1
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108891642 (l3mbtl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108891642 (l3mbtl1)
03036 Chromosome and associated proteins [BR:
lcf03036
]
108891642 (l3mbtl1)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
108891642 (l3mbtl1)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
108891642 (l3mbtl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
MSL3_chromo-like
SAM_2
Motif
Other DBs
NCBI-GeneID:
108891642
NCBI-ProteinID:
XP_018544390
UniProt:
A0A4W6BM80
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Position
LG6:complement(8984175..9000523)
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AA seq
837 aa
AA seq
DB search
MSAKVNMEAPAKEDRRPLDPSSSSPNEAVLICGSDGVAKKARPQPHTTTALLLPAPAPSH
KVEVTQAVAVGDPGKGGRASQTATPTLTQVGGACSIVHVLEWKEGMAILPSSNLKFCVSD
VGTLSTLITPGTTSSTTEPAAGTSGRSTDAEAAPADKPDVSAPVGSVRGVAVEPGRLVPV
KPEVQVGLGQHNHDPRAQRTYTEELRREPVTDKRSAGVEKVPAGGRVSSLNPDHLKPMRK
RKRKEYLSPSEEDSDIEGTDEKMDDSKADSRQIRGAGDSKTEQWTWAQYLEETKAVAAPN
KLFQESQRVPTVKNGFKQGMKLEGIDPQHPSMYFVLTVAEVCGYRLRLHFDGYSDCHDFW
VNANSPDIHPAGWCESTGHKLHTPKGCKEEEFTWTNYLRMTKAQVAPKELFASPGRIDVK
CGFEIGMKLEAVDRMNPSLICVATVTDMVDDRFLVHFDNWDDTYDYWCDASSPYIHPIGW
CQERNLPLTPPQDYPDQGRFSWPRYLEETGSKAVAPDAFKVRVAHSFQPQMKLEAVDKRS
PGLIRVATVEEVETHRIKVHYDGWSHVYDEWMDSDHPDIHPAGWCEATGHPLKVPPRDPK
TQQPHGVREPPATGQSTYPSSVPCKPISHPRTNKYSFHNRKCPTPGCDGSGHVTGRFTAH
HCISGCPLAERNQGRLKADLSDSECKRNLFFGQRTKKTHYRGRIGRPPKYRKNQQRDYQN
MSSEGVYPSLFMSALSGQSDRTLSLCWEQHCKLLPGVQGIHASQVAAWSIEEVFRFVQNL
IGCEEQARLFKEEMIDGEAFLLLTQTDIVKIMSIKLGPALKISNAILMFKSTDEGLK
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaaagtgaacatggaggctccagccaaagaagatcgtagacctttggacccg
tcctcctcatcccccaacgaggctgtcctcatctgtgggagtgatggtgtggctaaaaag
gcccggccccagccccacaccaccacggctctcctcctgccagctcctgctcccagccat
aaggtggaggtgactcaagcggttgctgtgggagatccaggtaaaggaggcagggccagt
cagacggccactcccaccttgacacaggtgggtggggcttgtagcatcgtccatgtcctg
gagtggaaggagggcatggccatcctgcccagcagcaacctcaagttctgtgtgagtgac
gttggaacgctgagcacactgatcaccccagggaccaccagcagcaccactgaaccagca
gcagggacttctgggagatctactgacgcagaagctgctccggcagacaagccagatgtg
tcagctcctgttggctctgtgagaggtgtggccgtggagccggggaggttggtgccagtc
aaacctgaagtccaggtgggactgggacaacataaccatgatcccagagctcagaggacg
tacacagaggagctacgcagggagcccgtcaccgacaagaggagcgccggggtggagaag
gtgccagcaggtggaagggtctcctccctcaaccctgatcacctgaaacccatgaggaag
aggaagaggaaggagtacctaagtccttcggaggaagactctgacattgaaggaacggat
gagaaaatggatgactctaaagcagacagcagacaaatcagaggagctggagacagtaag
acagagcagtggacatgggctcagtatctggaagaaaccaaagctgttgctgctcccaac
aagcttttccaagagtcccagagagtgccaacagtaaagaatggctttaaacaggggatg
aagctggaaggcatcgatccgcagcatccatccatgtacttcgtcctcactgtggccgag
gtctgtggttaccggctgcgactccattttgacgggtactctgactgccatgacttctgg
gtgaatgccaactcccctgacatccaccctgcagggtggtgtgagagcacaggacacaaa
ctgcacactcccaaaggttgtaaagaggaggagtttacctggaccaactacctgagaatg
actaaagcacaagtggctcccaaagaattgtttgccagtcctgggaggatcgatgtgaag
tgcggtttcgagataggaatgaagctggaggctgtcgaccgtatgaacccctccctcatc
tgtgtagcaaccgtcactgacatggtagacgaccgcttcctggttcattttgacaactgg
gatgacacatatgattactggtgtgatgccagcagtccgtacattcatcctattggttgg
tgccaggagaggaacctgcccctaacaccaccccaagattacccagaccagggccggttc
tcctggcctcgctacctggaggagactggttctaaagcagtggctcctgacgcctttaaa
gtgcgtgtggcccacagcttccagcctcagatgaaactggaggctgtggacaagagaagt
cctggtctgatcagagtggccacagtggaggaggtcgagactcatcgcattaaggtccat
tacgatggctggagtcatgtctatgatgagtggatggactcagatcacccagacatacat
ccagcaggctggtgtgaggcgactggtcacccactaaaagttcccccacgggaccccaaa
acacagcagccacatggtgtgagggagcctcctgctacgggtcagtcgacctacccctcc
tctgttccctgcaaacccatcagccaccccagaaccaacaagtacagcttccacaatcgg
aagtgtccaactcctggttgtgacggttcaggccatgtgaccggtcgtttcaccgcccat
cactgcatatccggctgcccactggctgagcgtaaccagggcaggctgaaggctgacctg
tcagactcagagtgcaagaggaacctcttctttggccagaggaccaagaagacccattac
cgtggcaggattggtcgtcctcctaaatacaggaagaaccagcagagagattaccagaac
atgtcctcggagggcgtgtatccgtcactgttcatgtcggctctgagcggtcagtcggac
aggactctgtctctctgctgggagcagcactgtaagctgctgcctggcgttcagggcatc
catgccagtcaggtggcggcatggagcatcgaagaggtcttcaggtttgtccagaatctt
atcggctgtgaagaacaggctcgtctcttcaaggaagagatgattgatggggaggccttc
ctgctgctcacccagactgacattgtgaagatcatgagcatcaagcttggccccgccctc
aagatctccaacgccattctcatgttcaagagcacagacgagggactcaagtga
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