Lates calcarifer (barramundi perch): 108891648
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Entry
108891648 CDS
T04895
Name
(RefSeq) tumor protein p73 isoform X2
KO
K10148
tumor protein p73
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04115
p53 signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
108891648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108891648
Transcription factors [BR:
lcf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
p53
108891648
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Gene cluster
GFIT
Motif
Pfam:
P53
P53_tetramer
SAM_2
SAM_1
SAM_EPH
Motif
Other DBs
NCBI-GeneID:
108891648
NCBI-ProteinID:
XP_018544399
UniProt:
A0AAJ7Q1V9
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All DBs
Position
LG6:complement(9646939..9668758)
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AA seq
671 aa
AA seq
DB search
MSQSTVTEEGGTFEHLWSSLEPDSTYFELPPGSQPGEQPVPSTSTPGSHRSAAEVSMDVY
HMRDMNDNVMSQYNLLSSSMESLGSRATSASPYSSENASSSAVPTPSPYSQPNSTFEGLS
PAPAIPSNTDYPGPHTFQVSFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQIKLSSSPP
HGSIIRAMPVYKKAEHVTEVVKRCPNHELGRDFNDGQTAPASHLIRVEGNNLCQYVDDPV
TGRQSVFVPYEAPQVGTEFTTILYNFMCNSSCVGGMNRRPILIIITLETRDGQVLGRRSF
EGRICACPGRDRKADEDHFREQQALNESVAKNGSASKRNFKQSPPNIPSPNINMRKRRHG
EEEIYYIPVRGRENFELLMKIKDSLELVELVPQPLVDSYRQQTQQQLLQRPSHIASPSCY
SPLSNMNKLHGHGGLSKPPSVNQLVGQQPQQHHTAPTSIPHMGSNMLNSHHMQANGDMNG
GHSSQTIVSASHCSPPPPYNPDPSLVSFLTSLGCQNFIEYFTSQGLQTVYHLQTLSMEDL
GALKIPEQSRLAIWRGLQDMKQGAPIQLPTSSHHHDYHGQQLLRSSSNMAASAMAAIGAA
GGELQRQRVMEAVHFRVRHTITIPNRSGVVGTSGMATAADEWADFGFDMPDCKMSRSKHS
IKEEFMESDVH
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagtccactgttactgaagaaggaggcaccttcgagcacctgtggagctccctg
gagccagacagcacctactttgagctccccccaggcagccagccaggtgagcaaccggtg
ccttctaccagcaccccagggagccatcgcagcgctgcagaagtgtccatggatgtctac
cacatgagggacatgaatgataatgtgatgtcccagtacaacttgctgagcagcagcatg
gagagcctggggagccgtgcgacgtccgccagcccctacagctccgagaacgcctcttca
tcggccgtgcccaccccctctccctactcccagcccaactccaccttcgagggcctgtcg
cctgccccagccatcccctccaacaccgactaccccggaccgcacaccttccaggtgtcc
ttccagcagtccagcaccgccaagtctgccacatggacctactcacccttgttgaagaag
ctctactgtcagattgccaagacctgtccaatccagatcaaactgtcctcctctcctcca
catggcagcatcatcagagccatgcccgtctacaagaaggcggagcatgtcacagaagtg
gtcaaacgttgccccaatcatgaactggggcgagatttcaatgatggtcaaacagcccca
gccagtcacctgatccgagtggaggggaataacctctgtcagtatgtggatgatcctgtc
actggccggcagagtgtcttcgtgccctatgaggctccacaggtggggactgagtttacc
accatcctgtacaactttatgtgcaacagcagctgtgtgggtggcatgaacaggagaccc
atcctcatcatcatcactttggagaccagagatggtcaagtcttgggcaggaggtcgttt
gaaggtcggatatgtgcgtgccccggcagagaccgcaaagctgatgaggaccatttcagg
gaacaacaggccctgaatgagagtgtggccaaaaatggtagcgccagcaaacgcaacttt
aaacagagtccgccaaatattcctagcccaaatattaacatgaggaagaggcggcatgga
gaagaagagatttactatattcctgttcgtggaagggagaactttgagctgctgatgaag
attaaagacagtttggagctggtggagctggtgccgcagccactagtggactcctacaga
caacaaacacagcagcaactgctgcagagaccgagtcatatagcatccccctcctgttac
tctccgctgtccaacatgaacaagcttcatggccacggaggcctcagcaaaccgccctca
gtcaaccagctggtggggcagcagccccagcaacaccacactgcccccacctccatacct
catatgggttcaaacatgctcaacagccaccacatgcaggccaatggcgatatgaacggt
ggccacagcagtcagactatagtgtctgcttcccactgcagcccgccccctccgtataac
cctgaccccagccttgtcagttttcttaccagtctgggctgtcagaacttcattgagtac
ttcacctcccaaggcctccagactgtctaccatcttcagactctctccatggaggattta
ggagcactgaagataccagagcagtcccgccttgccatctggcgaggtctgcaggacatg
aaacaaggtgctcccatccaattgcccacctcttcgcatcaccatgactatcatggccag
cagcttcttcgctccagcagcaacatggctgcctctgcgatggcggctattggggctgct
ggtggggaactgcagcgtcagcgcgtcatggaggctgtgcactttcgtgtccgccacacc
atcactatccccaacaggtcaggtgttgttgggacatcagggatggcaacagctgctgat
gagtgggctgactttggatttgacatgcccgattgcaagatgtctcgtagcaagcactcc
atcaaagaggagtttatggaaagtgatgtccactga
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