Lates calcarifer (barramundi perch): 108891678
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Entry
108891678 CDS
T04895
Name
(RefSeq) charged multivesicular body protein 4b
KO
K12194
charged multivesicular body protein 4A/B
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03250
Viral life cycle - HIV-1
lcf03272
Virion - Hepatitis viruses
lcf04144
Endocytosis
lcf04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108891678
03272 Virion - Hepatitis viruses
108891678
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108891678
09143 Cell growth and death
04217 Necroptosis
108891678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108891678
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108891678
Membrane trafficking [BR:
lcf04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
108891678
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108891678
Exosomal proteins of other body fluids (saliva and urine)
108891678
Exosomal proteins of colorectal cancer cells
108891678
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
SYF2
DUF6437
HAT_KAT11
Motif
Other DBs
NCBI-GeneID:
108891678
NCBI-ProteinID:
XP_018544456
UniProt:
A0A4W6BLX0
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All DBs
Position
LG6:complement(9013934..9019255)
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AA seq
222 aa
AA seq
DB search
MSLFGKIFGGGGKGGKGPSPQEAIQKLRETEEMLTKKQEFLEKKIEQELQIAKKNGTKNK
RAALQALKRKKRYEKQLAQIDGTLSTIEFQREALENANTNTEVLKNMGFAAKAMKSAHEN
MDIDKVDDLMQDITEQQELAQEISDAISKPVGFGEEFDEDELLAELDELEQEELDKNLLE
IGGPENVPLPNVPSTSLPSRPAKKEEDEDDMEDLQRWAMEAM
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgtttggtaaaatatttggaggaggaggaaaaggaggaaagggaccgagcccg
caggaggcgatccagaaactccgagagacggaggagatgctaacgaagaaacaggaattt
ctggagaaaaagatcgagcaggagctgcagatcgccaagaaaaacggcacgaaaaacaaa
cgagcggccctgcaggccttgaaaagaaagaagcggtatgagaagcagctcgcccaaatt
gacggcacgctgtcgactatcgagttccagagggaggccctggagaacgccaacaccaac
actgaagtgctcaagaacatgggcttcgctgccaaggccatgaagtctgcccatgaaaac
atggacattgacaaggtggacgacctgatgcaggacattacggagcagcaggagctggcc
caggaaatttctgacgccatctctaaacccgtcggcttcggagaggagtttgatgaggac
gagctgctggcagagctggatgagctggaacaggaggagctggacaaaaacctgctggag
atcgggggaccagagaatgtccccctccccaacgtgccttctacttcattaccctccaga
cctgccaagaaagaggaggacgaggacgacatggaggacctgcagcgctgggcgatggaa
gccatgtaa
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