Lates calcarifer (barramundi perch): 108891691
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Entry
108891691 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: mucin-17-like
KO
K26585
methyl-CpG-binding domain protein 6
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108891691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108891691
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
108891691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
Motif
Other DBs
NCBI-GeneID:
108891691
NCBI-ProteinID:
XP_050927095
UniProt:
A0AAJ8B7F6
LinkDB
All DBs
Position
LG6:9177032..9192017
Genome browser
AA seq
1691 aa
AA seq
DB search
MMGGSETVSGDKDGVHTTAIHVPIGWQRRVEGGQVIYVSPSGTALSCLDEVKTYLLTDGT
CKCGLECPLIIHKVFNFTVGVKVEQHSQPLGKTEQDMTKLCNHRRKVVAMAALCRSMQAS
QLPFANLHHPEVSSRVDSRDPKGVLVEREEEDRGIYHPKLHPVPARPHNNFHANPCASPK
SSHQFIYPYNGSSPILHPGTNSHHPLDTLRRLHQPPPLPASSTSSSNPSFPSYSAAQRSP
RTPTPQNISQGQRTPKTPETPGSPRLGPLSSPPPSSPMTLGGGARGGQTHAHHPHGVIVG
GSTLPPSPSLSPSVQNMNCVSPHQRTRHPSASPSPLSEQGGGSEGGGQMGSNLSQRRKST
SSSPHSPLPGGSPNPNPHFPKYKLEDILEQFKNSGNSSTNNHHLLNPNNPSLLTNQSSSN
PHALSSKPSKTIMSQTSSAGPTGFGLNSAGPSNLPLGPFLNHHHSHQGKMPHSTSFPASN
LLSAAAKAQLANQITQGQSSNAASNAVSLPSSLEVLKDAQHQQSSKVTNSTLHNSHPPSS
IASTRPPHPSLAAASAILFPPSHSLAQSLASSLPQLPPTAERNASHRKRQRRSPTVLSML
RDTQQLANGPRKTPPGEAVSATVINLSSSSSTTSSHSSSSSTSAVQNQNAVLLETHHPLL
PGQMTRLPAPRQTAHLSRPPRQNEALDFTTVLTPTPLGLDPPTQPLSALLHLLSVQNAQA
SASASTSASAQPGSVSVEGGGHTNKQSPKLSPPSPAPHSNFRHPQSRSPCRTNDTNPLPS
VPHPLSPPPTSSQFRSVQSHSHSQSTKSSPQERHSPTSTVPPNSNVALHNSSSPSQHTSP
TPSDNHEPTESHIPTVDSVSQASLQEATPEGTVAVEISSNGMSTSMDLSHSQGSVSMAIS
TSPKPLDLSNHVLALLAASSTVPQGEGGSSDRTTDVEMSSQGNHTAEPEEPGCVDPKDTT
VTKSPAANSPGPTISSRLGDNNNPPPLSCRGLNHFLTSAEAFPFMNQEQLLQLLSSTGGL
PSLLDPTVLASLPLGGLWLGGQHAQIPPASATLQTPQNLAEQQQSEQQQQLLIQQDTHQQ
NQDQQQKQQQINNNPLFPLLPLLSGAQGELPLNLLGLLNPLPPPASTPTPGQEADLGLTE
KPSLQALLMASLLLGQQQAPLLPLSGLGQLSQVSLEVPLQQPQQIPTTLEGLTLDKASGL
LDPSTLPGPGLLEVAQGLLPIPPGAEGTIQALQSLLLPAALTPPPAAFLPLSPALLTAAL
SSAELHPPPHTQLAPTQQTQHTQPQVPADAGVDTLIPLSLQGKDNPILQQLLPTLLNSAV
LGDLSGITGLHNMVGIGPGSILLPPVQTSALGMPLLQGPDGAINLLNNIQLNLAPPSEGE
KPVSIQDTQSPAPQEDIPASHIAPDVVPSPASAPPPAPAPAQEPTPPPQRESEGRSVIDP
YTSFMDTIYTSFLQVSAKEQEDGAHLGPSDPTSPFCALPPVSFPLEHHTPSTPVTTLPQA
SAPVSLSPRRACSLRNPDLSRLSLEAAAHSPAQGTPKPIEDGSTSPLQRKPVIVEGHIHP
EPPMPPIYLEEAKTDCTGPAAAVCPFVEAGGDRQGHLPHSGYLSPRDGCSGRPSEETGGT
LLHTEQERDQAGAAGGVRRGRKRKQTLQNVLEDFRDMDATALEETKATTALLKPERSVRG
RRRRGARSQRQ
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaggcagtgagactgtcagtggggacaaggatggggtccataccactgcaata
cacgtccccatcggctggcagaggagagtggagggtggacaggtgatctatgtcagtccc
agtggcactgccctgtcctgtctagacgaggtcaagacctatctgttgaccgatggcacc
tgcaaatgtggtctggagtgtccactcatcattcacaaggttttcaacttcaccgtggga
gtgaaggtggaacagcacagccagccgttaggcaaaacagagcaggacatgaccaaactg
tgtaaccaccgcaggaaagtggtagcgatggctgctctgtgtcgcagtatgcaggcctca
cagctgcccttcgccaaccttcatcatccagaggtgagcagtcgagtggacagccgtgat
ccaaagggggtacttgtggagcgggaagaagaggaccgtggcatttaccatcccaaactc
catccagtccctgctcgaccccacaacaacttccacgcaaatccctgtgccagccccaaa
tcctcccaccagtttatttacccttataatggttcctcccccatacttcacccaggcaca
aactctcaccatcccttagacactttgagaaggcttcaccagcctcctcctctccctgcg
tcctccacctcctcctccaacccctcattcccatcttacagcgctgcccagaggtcgccc
cgcacgcccactcctcagaacatcagccaaggtcaaagaacacccaaaacgccagagacc
cctggttctcctcggctagggcccctctcttcaccccctccctcttcccctatgactctt
ggtggaggagcaagaggaggacagactcatgctcatcatcctcatggtgtcattgtagga
ggctccaccctccctccatccccctccctctcaccctctgttcaaaacatgaattgtgtt
tcccctcaccagcggacccgccacccctcagcctctccttcccctctctctgagcagggc
ggaggctcagaaggaggaggacagatgggaagtaacttgtctcagcggaggaaatccacc
tcttcctctccacactcccctctccctggtggttccccaaaccccaacccacactttcca
aagtacaagctggaagatatcttggagcagtttaagaactcaggcaacagcagcactaat
aaccaccacctcctaaaccctaataacccctccttactgaccaaccaaagcagtagcaac
cctcatgctctctcctcgaagccctcaaagactatcatgagtcagacttccagcgcagga
cctacaggttttgggttgaactctgcaggcccctctaatttacctctggggccgtttctg
aaccaccaccacagccatcagggaaaaatgccacactccacttctttccctgcgagtaac
ttgctctctgcggctgccaaggctcagctggctaaccagataacccagggccagagctca
aatgcagccagcaatgcagtgagcttgccttcttctctggaggtcttgaaagatgcacaa
caccaacagtcatcaaaggtaacaaacagcactttacataacagccaccctccctcctcc
atcgcttctactaggcctccccatccctcccttgcagcagcctccgccatcctctttcct
ccatcccactctctggcccagtccctggcttcctctttgccccaactgcctcccacagca
gagcgtaatgcgtcgcacaggaagaggcaacggcgatctccgacagtgctcagcatgtta
agagacacccagcagctggctaatgggccacggaagaccccaccaggagaggctgtctct
gctacagttatcaacctttcctcatcttcctccaccacctcctcacactcctcctcctcc
tctacctcagctgtgcagaaccagaatgctgtcttgttggaaacccatcatcctctcctc
cccgggcagatgaccaggctgccggctcctcggcagacagcacacctttccaggcctcct
cgacaaaacgaagctctggatttcactacagtcctgacacctacacctcttggcttggat
cctccaactcagcctctatctgctctgttacacctgctcagtgtacagaatgcgcaggcc
tcagcttcagcatccacttctgcatctgctcagcctggatctgtgtctgttgaaggaggt
ggacacactaataaacagagccccaaactgtcgcccccctctcccgctcctcattctaac
ttcaggcacccgcagagccggtcaccctgccgaaccaatgacactaatcctctgccttct
gtgccacatccactctctcctcctcccacatcctctcagttcagatcagtgcagtctcat
tcacactctcagtcaactaaatcaagtcctcaagaaagacattctccaacttcaacagtg
ccgccaaactcaaatgtagctttacacaacagcagcagcccatcacagcatacgtctcca
actccctcagacaaccatgaaccaactgagagtcacattcctacagtagattctgtttcc
caggcatctttgcaggaagccacaccagagggcactgtggcagtagagatcagtagtaac
ggcatgtcaacatcaatggacctgagtcattctcaaggcagtgtttctatggcaatatcc
acctccccaaagcctcttgatcttagcaaccatgtcctggcccttctcgcagcatcttcc
actgtgccacagggggagggcggctcctccgaccgtaccactgatgttgagatgtcttcc
caaggaaatcacactgcagagccagaggagcctggatgcgtggacccgaaggacaccaca
gtgaccaaatctccagcagccaatagtcctgggcccaccatctcctctcgtcttggggat
aataacaatcccccccccctcagctgtcgcggactcaaccacttccttacctctgcagag
gccttccccttcatgaaccaagagcagctgctccagctgctgtcatccacagggggtcta
ccatccctcctggacccaacagtccttgcttcattgcccctagggggattgtggttggga
ggacaacatgcacagataccccctgccagtgctacactacaaacaccacagaatcttgca
gagcagcagcaatcagagcagcagcagcagttgctgatacaacaagacacacatcagcaa
aaccaggatcaacaacagaaacaacaacagataaataacaatcctctgtttcccctgttg
ccattgttgagtggtgcccaaggggagttgcctcttaaccttttgggcttattgaacccg
ctcccacccccagcctcaacccctactccggggcaggaagctgatttagggctaacagaa
aaacctagccttcaggctctgcttatggcgtccttgttgcttgggcaacagcaggcacct
ttgttacctctgtctgggctgggtcagttgagccaggtcagtttggaagttcctctccag
cagccacaacaaatccccaccacattggagggcctcactctggataaggcttctggcctc
ctggatccatctactctacccggcccagggctcttggaggtcgcccagggccttctcccc
attcctccaggagctgagggcactatccaggccctgcagtctttgctccttcctgctgct
cttacccctccccctgcagccttcctgcccctcagccctgccttgctcactgctgccctg
agctctgccgagctccacccgcctccccacacccaattagctcccacgcagcaaacccaa
catacccaacctcaggtacctgctgatgctggtgttgacactctcatacccctatctctc
caaggcaaggacaaccccatcctccaacagttacttcccactttgcttaactctgctgta
ttaggagacctttctggcatcacaggactccataatatggtggggattggtccaggttcc
atcctcctacccccagtccagacctctgctttaggcatgcctctgctgcagggtcctgat
ggggccatcaatttgctcaacaacatacagctaaaccttgcaccaccctcagagggagag
aagccagtctcaatacaggatacacaaagccctgccccacaggaagacattccagccagt
catattgctcctgatgtggtccccagtcctgcttcagctccgcctccagctcctgccccg
gcccaagaacccaccccacccccccagcgagaatctgagggcaggtctgttattgatcct
tacacctctttcatggacacgatttatacttccttccttcaagtcagtgctaaagagcag
gaagacggggcccacttggggccatctgaccccacttcacccttctgtgccttaccgccg
gtttctttccctctggagcaccataccccgtctacccctgtcacaactctgccgcaggcc
agtgctccagtctccctgagtccccgtagggcatgttccctccgcaacccagatttatcg
cgactcagcctggaagcagcagcccattccccagcccaggggacacccaaacccattgag
gacggatctacgtcacccttacaaaggaagccagtcatagtagaaggacatattcaccca
gagcctcctatgccacccatatacttggaggaggctaagacagactgtactgggcctgct
gcagctgtgtgcccttttgtggaggcagggggtgataggcaggggcatcttccccattca
gggtacctcagtcccagggatggatgcagtgggcggcccagtgaggagacaggtgggaca
ttgctgcacaccgaacaggaaagggatcaagcaggagcagcaggtggagtcagaagagga
aggaaaaggaaacaaacgctacagaatgtgttagaagatttcagagacatggatgctaca
gcactagaggaaaccaaggctacgacagcactgctgaagcctgagaggtcagttcgcggc
agaaggcgacggggcgcaaggtctcagaggcagtga
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integrated database retrieval system
